RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 POLR1EQ9GZS1 481 aaKnown RBP12.61□□□□□ -0.39
ZNF548-201ENST00000336128 MANSC1Q9H8J5 431 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 UBA2Q9UBT2 640 aaPredicted RBP12.61□□□□□ -0.39
ZNF548-201ENST00000336128 SLC2A6Q9UGQ3 507 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 STARD13Q9Y3M8 1113 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 ACTL7AQ9Y615 435 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 CPQQ9Y646 472 aa12.61□□□□□ -0.39
ZNF548-201ENST00000336128 ALPK3Q96L96 1907 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 CHD5Q8TDI0 1954 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 GOLGA8TH3BQL2 631 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 SCAMP3O14828 347 aaKnown RBP12.6□□□□□ -0.39
ZNF548-201ENST00000336128 GJB3O75712 270 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 ADH1AP07327 375 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 EN2P19622 333 aaPredicted RBP12.6□□□□□ -0.39
ZNF548-201ENST00000336128 SERPINH1P50454 418 aaKnown RBP12.6□□□□□ -0.39
ZNF548-201ENST00000336128 PDE1CQ14123 709 aaPredicted RBP12.6□□□□□ -0.39
ZNF548-201ENST00000336128 ARMC3Q5W041 872 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 ESRP1Q6NXG1 681 aaKnown RBP12.6□□□□□ -0.39
ZNF548-201ENST00000336128 CCDC121Q6ZUS5 278 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 CCDC149Q6ZUS6 474 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 SETD3Q86TU7 594 aaPredicted RBP12.6□□□□□ -0.39
ZNF548-201ENST00000336128 TMC8Q8IU68 726 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 DCLK2Q8N568 766 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 OTUD6BQ8N6M0 293 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 ARMC2Q8NEN0 867 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 SP7Q8TDD2 431 aaPredicted RBP12.6□□□□□ -0.39
ZNF548-201ENST00000336128 PTPRN2Q92932 1015 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 ISL2Q96A47 359 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 ATXN7L3BQ96GX2 97 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 RANBP9Q96S59 729 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 PRKD2Q9BZL6 878 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 TREX1Q9NSU2 369 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 NSMCE4AQ9NXX6 385 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 ARL2BPQ9Y2Y0 163 aa12.6□□□□□ -0.39
ZNF548-201ENST00000336128 CCT8L1PA6NM43 557 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 GREM1O60565 184 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 GLRA3O75311 464 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 TOP3BO95985 862 aaKnown RBP12.59□□□□□ -0.39
ZNF548-201ENST00000336128 C8AP07357 584 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 HDCP19113 662 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 BGNP21810 368 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 GLDCP23378 1020 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 MAGEA12P43365 314 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 ABCG1P45844 678 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 SERPINB8P50452 374 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 CORO7P57737 925 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 SIRPB2Q5JXA9 342 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 RNF219Q5W0B1 726 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-201ENST00000336128 CXorf57Q6NSI4 855 aaKnown RBP12.59□□□□□ -0.39
ZNF548-201ENST00000336128 PSRC1Q6PGN9 363 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-201ENST00000336128 BBS5Q8N3I7 341 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 KREMEN2Q8NCW0 462 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 MRPS31Q92665 395 aaKnown RBP12.59□□□□□ -0.39
ZNF548-201ENST00000336128 TCF25Q9BQ70 676 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 MCMBPQ9BTE3 642 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 CINPQ9BW66 212 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-201ENST00000336128 LRRC3Q9BY71 257 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 ACE2Q9BYF1 805 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-201ENST00000336128 SNX15Q9NRS6 342 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 SEPT3Q9UH03 358 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 TBC1D30Q9Y2I9 924 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 MTO1Q9Y2Z2 717 aaKnown RBP12.59□□□□□ -0.39
ZNF548-201ENST00000336128 MIA3Q5JRA6 1907 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 HEATR9A2RTY3 570 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 LCHNA4D1U4 455 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 TIMM44O43615 452 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 TBL1XO60907 577 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 CSPG5O95196 566 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 VAPBO95292 243 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 ATXN1LP0C7T5 689 aaKnown RBP12.59□□□□□ -0.39
ZNF548-201ENST00000336128 NEFHP12036 1026 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 ARNTP27540 789 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 CTNNB1P35222 781 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 ARCN1P48444 511 aaKnown RBP12.59□□□□□ -0.39
ZNF548-201ENST00000336128 ALG1LQ6GMV1 187 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 KIAA0930Q6ICG6 404 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-201ENST00000336128 Q6ZNB5 142 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 GAREM2Q75VX8 874 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 OTOAQ7RTW8 1153 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 CMC1Q7Z7K0 106 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 CNTN4Q8IWV2 1026 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 HJURPQ8NCD3 748 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-201ENST00000336128 FEM1CQ96JP0 617 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 RAD9AQ99638 391 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 MGME1Q9BQP7 344 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 EMILIN2Q9BXX0 1053 aa12.59□□□□□ -0.39
ZNF548-201ENST00000336128 LOC285095A0A1B0GVY8 99 aa12.58□□□□□ -0.4
ZNF548-201ENST00000336128 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.4
ZNF548-201ENST00000336128 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.4
ZNF548-201ENST00000336128 PAMP19021 973 aa12.58□□□□□ -0.4
ZNF548-201ENST00000336128 TYK2P29597 1187 aa12.58□□□□□ -0.4
ZNF548-201ENST00000336128 ERVFC1P60507 584 aa12.58□□□□□ -0.4
ZNF548-201ENST00000336128 ZXDBP98169 803 aa12.58□□□□□ -0.4
ZNF548-201ENST00000336128 MSLNQ13421 630 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-201ENST00000336128 RFTN1Q14699 578 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-201ENST00000336128 PPM1JQ5JR12 505 aa12.58□□□□□ -0.4
ZNF548-201ENST00000336128 STXBP5Q5T5C0 1151 aa12.58□□□□□ -0.4
ZNF548-201ENST00000336128 TSTD2Q5T7W7 516 aa12.58□□□□□ -0.4
ZNF548-201ENST00000336128 N4BP2L1Q5TBK1 243 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-201ENST00000336128 PLPP4Q5VZY2 271 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms