RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 CCDC115Q96NT0 180 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF341Q9BYN7 854 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 SEMA6AQ9H2E6 1030 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 RANBP3Q9H6Z4 567 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 IL1RAPQ9NPH3 570 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 NYAP2Q9P242 653 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CDH7Q9ULB5 785 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 F5H5T6 163 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 SLC30A4O14863 429 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 OTCP00480 354 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CCNCP24863 283 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 DCKP27707 260 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PRKG2Q13237 762 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF268Q14587 947 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 LSM12Q3MHD2 195 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CMPK2Q5EBM0 449 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PPP1R15BQ5SWA1 713 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 DDX43Q9NXZ2 648 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 USP17L8P0C7I0 530 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 RPA3P35244 121 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 SLC18A1P54219 525 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 KLHL22Q53GT1 634 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CCNYL2Q5T2Q4 361 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 C1orf189Q5VU69 101 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 TTI2Q6NXR4 508 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 UXS1Q8NBZ7 420 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CENPNQ96H22 339 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 SLITRK1Q96PX8 696 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 WRNIP1Q96S55 665 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 UNKQ9C0B0 810 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 RASSF1Q9NS23 344 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 OPTCQ9UBM4 332 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 SIK3Q9Y2K2 1263 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 KANTRA0A1W2PQU2 76 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PTGES3LE9PB15 166 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PLIN3O60664 434 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 KCNA6P17658 529 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 RPL21P46778 160 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 FSCN1Q16658 493 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PCID2Q5JVF3 399 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CIAPIN1Q6FI81 312 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CYP20A1Q6UW02 462 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ABRAQ8N0Z2 381 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ALLCQ8N6M5 410 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 SLC4A5Q9BY07 1137 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 NFAT5O94916 1531 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ALKQ9UM73 1620 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 NOTOA8MTQ0 251 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 TPP1O14773 563 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 AIREO43918 545 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ADRA1DP25100 572 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 TUFMP49411 452 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ERVK-9P63128 1117 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 MPP1Q00013 466 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 EGFLAMQ63HQ2 1017 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 TMC7Q7Z402 723 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 MCOLN2Q8IZK6 566 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 HPDLQ96IR7 371 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PCDH18Q9HCL0 1135 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CHMP1AQ9HD42 196 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 AGAP1Q9UPQ3 857 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ISPDA4D126 451 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PRODHO43272 600 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 COL6A2P12110 1019 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 SLC2A4P14672 509 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 YAP1P46937 504 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 MARSP56192 900 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 BNIP1Q12981 228 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PERM1Q5SV97 790 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 TDRD10Q5VZ19 366 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PI16Q6UXB8 463 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 TMEM192Q8IY95 271 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 LPCAT1Q8NF37 534 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 BPIFB6Q8NFQ5 453 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 TPD52L3Q96J77 140 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 TRIM2Q9C040 744 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CHST12Q9NRB3 414 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 AGPAT3Q9NRZ7 376 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ENTPD4Q9Y227 616 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 SMCO3A2RU48 225 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 OGTO15294 1046 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 SUV39H1O43463 412 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 EDF1O60869 148 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CBX6O95503 412 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 RORAP35398 523 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ERFP50548 548 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ATP6V0D1P61421 351 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ALFQ53S48 1182 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 SLC25A25Q6KCM7 469 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ARHGAP36Q6ZRI8 547 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CBWD2Q8IUF1 395 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 IGDCC4Q8TDY8 1250 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 REXO5Q96IC2 774 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ZDHHC15Q96MV8 337 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ACTR6Q9GZN1 396 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 WDCPQ9H6R7 721 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ACTR8Q9H981 624 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 XPNPEP3Q9NQH7 507 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 GTF2A1LQ9UNN4 478 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms