RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 ZNF528Q3MIS6 628 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 HEATR6Q6AI08 1181 aaKnown RBP16.27■□□□□ 0.2
LRRC28-202ENST00000331450 DSG4Q86SJ6 1040 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 ZSCAN30Q86W11 494 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 BBS5Q8N3I7 341 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 TMIEQ8NEW7 156 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 OR6K2Q8NGY2 324 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 HTR3CQ8WXA8 447 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 NKD2Q969F2 451 aaPredicted RBP16.27■□□□□ 0.2
LRRC28-202ENST00000331450 NSMCE3Q96MG7 304 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 HEPHQ9BQS7 1158 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 C10orf88Q9H8K7 445 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 NT5MQ9NPB1 228 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 RBM22Q9NW64 420 aaKnown RBP eCLIP16.27■□□□□ 0.2
LRRC28-202ENST00000331450 IL36AQ9UHA7 158 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 EVLQ9UI08 416 aaPredicted RBP16.27■□□□□ 0.2
LRRC28-202ENST00000331450 SARDHQ9UL12 918 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 DNPEPQ9ULA0 475 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 ATP8A1Q9Y2Q0 1164 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
LRRC28-202ENST00000331450 SAR1BQ9Y6B6 198 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 TNRC6BQ9UPQ9 1833 aaKnown RBP16.26■□□□□ 0.19
LRRC28-202ENST00000331450 INSIG1O15503 277 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 GJB3O75712 270 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 POP4O95707 220 aaKnown RBP16.26■□□□□ 0.19
LRRC28-202ENST00000331450 JCHAINP01591 159 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 IGLV3-19P01714 112 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 PRNPP04156 253 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 PXNP49023 591 aaPredicted RBP16.26■□□□□ 0.19
LRRC28-202ENST00000331450 METAP1P53582 386 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 MAXP61244 160 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 AP1S1P61966 158 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 CSTF1Q05048 431 aaKnown RBP16.26■□□□□ 0.19
LRRC28-202ENST00000331450 ZBTB16Q05516 673 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 CCNG2Q16589 344 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 DRICH1Q6PGQ1 229 aaPredicted RBP16.26■□□□□ 0.19
LRRC28-202ENST00000331450 SRLQ86TD4 932 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 CACUL1Q86Y37 369 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 CREG2Q8IUH2 290 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 MMAAQ8IVH4 418 aaKnown RBP16.26■□□□□ 0.19
LRRC28-202ENST00000331450 PRELID2Q8N945 189 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 PIP4K2CQ8TBX8 421 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 GRIN3AQ8TCU5 1115 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 PRCCQ92733 491 aaPredicted RBP16.26■□□□□ 0.19
LRRC28-202ENST00000331450 FAM131CQ96AQ9 280 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 SIPA1Q96FS4 1042 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 LRIG1Q96JA1 1093 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 NUDCD1Q96RS6 583 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 FAM126AQ9BYI3 521 aaPredicted RBP16.26■□□□□ 0.19
LRRC28-202ENST00000331450 CEP41Q9BYV8 373 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 CPEB1Q9BZB8 566 aaKnown RBP16.26■□□□□ 0.19
LRRC28-202ENST00000331450 POLR1EQ9GZS1 481 aaKnown RBP16.26■□□□□ 0.19
LRRC28-202ENST00000331450 ZDHHC6Q9H6R6 413 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 USP29Q9HBJ7 922 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 CD93Q9NPY3 652 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 SMARCAL1Q9NZC9 954 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 USP36Q9P275 1121 aaKnown RBP16.26■□□□□ 0.19
LRRC28-202ENST00000331450 SCML1Q9UN30 329 aa16.26■□□□□ 0.19
LRRC28-202ENST00000331450 KRIT1O00522 736 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 AXIN1O15169 862 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 RNASEH1O60930 286 aaKnown RBP16.25■□□□□ 0.19
LRRC28-202ENST00000331450 LEFTY1O75610 366 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 ZNF189O75820 626 aaPredicted RBP16.25■□□□□ 0.19
LRRC28-202ENST00000331450 ADH1BP00325 375 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 IL1BP01584 269 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 SP9P0CG40 484 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 CASQ1P31415 396 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 GKP32189 559 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 DRD3P35462 400 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 PSMD8P48556 350 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 IHHQ14623 411 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 TEX44Q53QW1 395 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 RALGPS1Q5JS13 557 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 FAM182AQ5T1J6 154 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 DARS2Q6PI48 645 aaKnown RBP16.25■□□□□ 0.19
LRRC28-202ENST00000331450 NCEH1Q6PIU2 408 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 KIAA1324Q6UXG2 1013 aaKnown RBP16.25■□□□□ 0.19
LRRC28-202ENST00000331450 WDR5BQ86VZ2 330 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 AADATQ8N5Z0 425 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 ARRDC2Q8TBH0 407 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 C1orf54Q8WWF1 131 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 TEKT5Q96M29 485 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 TUBGCP5Q96RT8 1024 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 NAP1L3Q99457 506 aaPredicted RBP16.25■□□□□ 0.19
LRRC28-202ENST00000331450 VAT1Q99536 393 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 OSBPL1AQ9BXW6 950 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 TPSD1Q9BZJ3 242 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 PABPC3Q9H361 631 aaKnown RBP16.25■□□□□ 0.19
LRRC28-202ENST00000331450 SEPT10Q9P0V9 454 aa16.25■□□□□ 0.19
LRRC28-202ENST00000331450 BCCIPQ9P287 314 aaKnown RBP eCLIP16.25■□□□□ 0.19
LRRC28-202ENST00000331450 CFAP69A5D8W1 941 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 C1QTNF3-AMACRE9PGA6 284 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 MID1O15344 667 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 KCNN4O15554 427 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 ZBTB24O43167 697 aaPredicted RBP16.24■□□□□ 0.19
LRRC28-202ENST00000331450 C5AR1P21730 350 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 SLC8A1P32418 973 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 MAPK8P45983 427 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 FNTBP49356 437 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 NRLP54845 237 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms