RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 ACTR8Q9H981 624 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 ZNF358Q9NW07 568 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 FGFR3P22607 806 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 FRG1Q14331 258 aaKnown RBP13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 CACHD1Q5VU97 1274 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 PKN3Q6P5Z2 889 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 RHBDF2Q6PJF5 856 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 RINLQ6ZS11 566 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 DHDDSQ86SQ9 333 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 WDTC1Q8N5D0 677 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 ATAD1Q8NBU5 361 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 ARRDC4Q8NCT1 418 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 TRPC4APQ8TEL6 797 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 FOPNLQ96NB1 174 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 PRPF18Q99633 342 aaKnown RBP13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 NDUFA13Q9P0J0 144 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 FETUBQ9UGM5 382 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 PADI3Q9ULW8 664 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 HOXA2O43364 376 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 PEX1O43933 1283 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 TBC1D4O60343 1298 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 CCNT2O60583 730 aaKnown RBP13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 SIN3BO75182 1162 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 PEX11AO75192 247 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 PIK3R1P27986 724 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 CLCN5P51795 746 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 DAOAP59103 153 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 KLF10Q13118 480 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 PSMD5Q16401 504 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 APLFQ8IW19 511 aaPredicted RBP13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 PEBP4Q96S96 227 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 STN1Q9H668 368 aaKnown RBP13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 CATSPERZQ9NTU4 200 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 C16orf96A6NNT2 1141 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 TK2O00142 265 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 PQBP1O60828 265 aaKnown RBP13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 FAM58BPP0C7Q3 252 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 SLC2A4P14672 509 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 PTPN3P26045 913 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 ATP5C1P36542 298 aaKnown RBP13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 PPP3CCP48454 512 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 AIF1P55008 147 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 ST8SIA6P61647 398 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 INSCQ1MX18 579 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 ARL13AQ5H913 290 aaPredicted RBP13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 SAMD4BQ5PRF9 694 aaKnown RBP13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 HPS6Q86YV9 775 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 MIER2Q8N344 545 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 SYT11Q9BT88 431 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 HAPLN2Q9GZV7 340 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 DYRK4Q9NR20 520 aa13.93□□□□□ -0.18
DNMT3B-202ENST00000328111 NT5C1B-RDH14C9J2C7 533 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 LRG1P02750 347 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 FASP25445 335 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 RANBP1P43487 201 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 LIMK2P53671 638 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 LRRC74AQ0VAA2 488 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 NOMO2Q5JPE7 1267 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 RETSATQ6NUM9 610 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 SCIMPQ6UWF3 145 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 OLFML1Q6UWY5 402 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 MON1AQ86VX9 555 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 MAGEC3Q8TD91 643 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 EBF4Q9BQW3 602 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 TMPRSS4Q9NRS4 437 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 VWA7Q9Y334 891 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 TMEM114B3SHH9 223 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 PEX6Q13608 980 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 BRMS1LQ5PSV4 323 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 TAC4Q86UU9 113 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 NXNL1Q96CM4 212 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 GATA5Q9BWX5 397 aaPredicted RBP13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 MCM8Q9UJA3 840 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 BLOC1S6Q9UL45 172 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 RAD54BQ9Y620 910 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 NAV1Q8NEY1 1877 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 CCL22O00626 93 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 WFS1O76024 890 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 TM7SF2O76062 418 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 F7P08709 466 aaPredicted RBP13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 IVDP26440 423 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 PSME3P61289 254 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 SEMA5AQ13591 1074 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 KRT72Q14CN4 511 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 PTPRNQ16849 979 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 RFWD3Q6PCD5 774 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 LDB1Q86U70 411 aaPredicted RBP13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 IGDCC3Q8IVU1 814 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 FAM126BQ8IXS8 530 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 TTC30BQ8N4P2 665 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 SLC35F5Q8WV83 523 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 HGH1Q9BTY7 390 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 ADAM7Q9H2U9 754 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 FZD10Q9ULW2 581 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 TEX264Q9Y6I9 313 aa13.92□□□□□ -0.18
DNMT3B-202ENST00000328111 URODP06132 367 aa13.91□□□□□ -0.18
DNMT3B-202ENST00000328111 MPP1Q00013 466 aa13.91□□□□□ -0.18
DNMT3B-202ENST00000328111 CYP51A1Q16850 503 aa13.91□□□□□ -0.18
DNMT3B-202ENST00000328111 ESRP1Q6NXG1 681 aaKnown RBP13.91□□□□□ -0.18
DNMT3B-202ENST00000328111 RIN3Q8TB24 985 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms