RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 CD300LGQ6UXG3 332 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 SLC24A5Q71RS6 500 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 FSTL5Q8N475 847 aaPredicted RBP10.79□□□□□ -0.68
CUL4A-201ENST00000326335 PPHLN1Q8NEY8 458 aaKnown RBP10.79□□□□□ -0.68
CUL4A-201ENST00000326335 CAPNS2Q96L46 248 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 RBBP8Q99708 897 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 ALG9Q9H6U8 611 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 PTGDR2Q9Y5Y4 395 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 PTCH2Q9Y6C5 1203 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 SMAPO00193 183 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 GSTA2P09210 222 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 CCDC166P0CW27 439 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 GKP32189 559 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 NUDT2P50583 147 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 PLD1Q13393 1074 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 POLD3Q15054 466 aaPredicted RBP10.79□□□□□ -0.68
CUL4A-201ENST00000326335 DCLRE1AQ6PJP8 1040 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 RIPOR1Q6ZS17 1223 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 HPS6Q86YV9 775 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 MYLIPQ8WY64 445 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 LRRC39Q96DD0 335 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 LRMDAQ9H2I8 198 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 CATSPERBQ9H7T0 1116 aa10.79□□□□□ -0.68
CUL4A-201ENST00000326335 DOCK6Q96HP0 2047 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 MAFKO60675 156 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 PEX11AO75192 247 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 UBTFL6P0CB48 400 aaPredicted RBP10.78□□□□□ -0.68
CUL4A-201ENST00000326335 RPL9P32969 192 aaKnown RBP10.78□□□□□ -0.68
CUL4A-201ENST00000326335 OCRLQ01968 901 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 ASPHQ12797 758 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 MBLAC2Q68D91 279 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 MYLK4Q86YV6 388 aaPredicted RBP10.78□□□□□ -0.68
CUL4A-201ENST00000326335 ARHGAP12Q8IWW6 846 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 DSEQ9UL01 958 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 PCDHB5Q9Y5E4 795 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 ATXN2Q99700 1313 aaKnown RBP10.78□□□□□ -0.68
CUL4A-201ENST00000326335 A0A1W2PQ45 241 aaPredicted RBP10.78□□□□□ -0.68
CUL4A-201ENST00000326335 A0A1W2PQY0 241 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 SUPT7LO94864 414 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 SLC11A1P49279 550 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 SERPINB8P50452 374 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 ABCE1P61221 599 aaKnown RBP10.78□□□□□ -0.68
CUL4A-201ENST00000326335 NIPAL4Q0D2K0 466 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 SH2D4BQ5SQS7 431 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 NEPROQ6NW34 567 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 PCSK9Q8NBP7 692 aaKnown RBP10.78□□□□□ -0.68
CUL4A-201ENST00000326335 NT5C3BQ969T7 300 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 MTBPQ96DY7 904 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 CPNE1Q99829 537 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 PIF1Q9H611 641 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 GPAMQ9HCL2 828 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 MARCH4Q9P2E8 410 aaPredicted RBP10.78□□□□□ -0.68
CUL4A-201ENST00000326335 KCNU1A8MYU2 1149 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 RAMP2O60895 175 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 SIN3BO75182 1162 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 CIB2O75838 187 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 DHRS4L1P0CG22 281 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 ZCCHC18P0CG32 403 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 STMN1P16949 149 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 GALNT2Q10471 571 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 CTC1Q2NKJ3 1217 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 GPR158Q5T848 1215 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 TMC7Q7Z402 723 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 MAVSQ7Z434 540 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 SUGP1Q8IWZ8 645 aaKnown RBP10.78□□□□□ -0.68
CUL4A-201ENST00000326335 ZNF570Q96NI8 536 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 ADAM28Q9UKQ2 775 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 C15orf41Q9Y2V0 281 aa10.78□□□□□ -0.68
CUL4A-201ENST00000326335 FAM155AB1AL88 458 aaPredicted RBP10.77□□□□□ -0.69
CUL4A-201ENST00000326335 PPP6CO00743 305 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 SIX3O95343 332 aaPredicted RBP10.77□□□□□ -0.69
CUL4A-201ENST00000326335 WEE1P30291 646 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 MAGEA3P43357 314 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 IDH3AP50213 366 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 MS4A13Q5J8X5 152 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 TPGS1Q6ZTW0 290 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 MFSD6LQ8IWD5 586 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 PCDH20Q8N6Y1 951 aaKnown RBP10.77□□□□□ -0.69
CUL4A-201ENST00000326335 FAXDC2Q96IV6 333 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 DNAJC1Q96KC8 554 aaKnown RBP10.77□□□□□ -0.69
CUL4A-201ENST00000326335 MUC3BQ9H195 1237 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 POMKQ9H5K3 350 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 IGSF9Q9P2J2 1179 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 DCDC2Q9UHG0 476 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 FBXO5Q9UKT4 447 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 ACOT9Q9Y305 439 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 MOXD2PA6NHM9 499 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 SERPINE1P05121 402 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 CTPS1P17812 591 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 KCNA5P22460 613 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 ABL2P42684 1182 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 LIMK2P53671 638 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 PITRM1Q5JRX3 1037 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 SPANXN3Q5MJ09 141 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.77□□□□□ -0.69
CUL4A-201ENST00000326335 MARK2Q7KZI7 788 aaKnown RBP10.77□□□□□ -0.69
CUL4A-201ENST00000326335 SNX32Q86XE0 403 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 SKA1Q96BD8 255 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 HDAC11Q96DB2 347 aa10.77□□□□□ -0.69
CUL4A-201ENST00000326335 SUSD3Q96L08 255 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms