RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 PFKPQ01813 784 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 ITKQ08881 620 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 DHCR24Q15392 516 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 EML3Q32P44 896 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 TANGO2Q6ICL3 276 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 LRRC8BQ6P9F7 803 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 VITQ6UXI7 678 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 CPA6Q8N4T0 437 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 WFIKKN2Q8TEU8 576 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 USP33Q8TEY7 942 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 UBLCP1Q8WVY7 318 aaPredicted RBP18.3■□□□□ 0.52
SYNE4-201ENST00000324444 NAT9Q9BTE0 207 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 FUT8Q9BYC5 575 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 CEP41Q9BYV8 373 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 TXLNGYQ9BZA5 131 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 IRF2BPLQ9H1B7 796 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 LINC00597Q9H2U6 94 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 NT5MQ9NPB1 228 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 TTLL3Q9Y4R7 772 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 SPAG6O75602 509 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 CD68P34810 354 aaPredicted RBP18.3■□□□□ 0.52
SYNE4-201ENST00000324444 MAGEA4P43358 317 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 MAPK8P45983 427 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 NSUN2Q08J23 767 aaKnown RBP eCLIP18.3■□□□□ 0.52
SYNE4-201ENST00000324444 SLC10A7Q0GE19 358 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 FCHO2Q0JRZ9 810 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 E2F5Q15329 346 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 PLEKHG6Q3KR16 790 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 FAXCQ5TGI0 409 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 AHI1Q8N157 1196 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 TAB3Q8N5C8 712 aaPredicted RBP18.3■□□□□ 0.52
SYNE4-201ENST00000324444 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.3■□□□□ 0.52
SYNE4-201ENST00000324444 PDCD7Q8N8D1 485 aaKnown RBP18.3■□□□□ 0.52
SYNE4-201ENST00000324444 SERPINB12Q96P63 405 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 CCDC77Q9BR77 488 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 NUP205Q92621 2012 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 MAP2K7O14733 419 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 TMEM63AO94886 807 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 HLA-DQB2P05538 268 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 GSTA2P09210 222 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 PSMC3P17980 439 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 CA4P22748 312 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 MZF1P28698 734 aaPredicted RBP18.29■□□□□ 0.52
SYNE4-201ENST00000324444 PHBP35232 272 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 NPY2RP49146 381 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 LMAN2Q12907 356 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 PDIA2Q13087 525 aaKnown RBP18.29■□□□□ 0.52
SYNE4-201ENST00000324444 CCDC38Q502W7 563 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 FSCBQ5H9T9 825 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 ANKRD22Q5VYY1 191 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 DENND2CQ68D51 928 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 ALG1LQ6GMV1 187 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 LRIG3Q6UXM1 1119 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 CNPY4Q8N129 248 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 OR52K2Q8NGK3 314 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 PYROXD1Q8WU10 500 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 BHMTQ93088 406 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 ALG14Q96F25 216 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 IMP4Q96G21 291 aaKnown RBP18.29■□□□□ 0.52
SYNE4-201ENST00000324444 MGME1Q9BQP7 344 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 FSD1LQ9BXM9 530 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 PLA2G2FQ9BZM2 168 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 SAYSD1Q9NPB0 183 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 ABCB8Q9NUT2 735 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 PLK2Q9NYY3 685 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 SLC25A13Q9UJS0 675 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 GGA2Q9UJY4 613 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 SLC8A2Q9UPR5 921 aa18.29■□□□□ 0.52
SYNE4-201ENST00000324444 MAGEB16A2A368 324 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 GOLGA8MH3BSY2 632 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 ZMPSTE24O75844 475 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 TTC4O95801 387 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 ASLP04424 464 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 SERPINF2P08697 491 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 PABPC1P11940 636 aaKnown RBP18.28■□□□□ 0.52
SYNE4-201ENST00000324444 HSD17B3P37058 310 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 NNMTP40261 264 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 PITRM1Q5JRX3 1037 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 KCTD11Q693B1 232 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 NUDT18Q6ZVK8 323 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 DTWD2Q8NBA8 298 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 GDAP1L1Q96MZ0 367 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 FAM83CQ9BQN1 747 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 BFARQ9NZS9 450 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 VPS51Q9UID3 782 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 FBXO10Q9UK96 956 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 SLC27A6Q9Y2P4 619 aa18.28■□□□□ 0.52
SYNE4-201ENST00000324444 ZFHX2Q9C0A1 2572 aaPredicted RBP18.27■□□□□ 0.52
SYNE4-201ENST00000324444 NYNRINQ9P2P1 1898 aaKnown RBP18.27■□□□□ 0.52
SYNE4-201ENST00000324444 COL4A2P08572 1712 aa18.27■□□□□ 0.52
SYNE4-201ENST00000324444 TCRBV7S3A2A0A539 114 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 SDR42E2A6NKP2 422 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.27■□□□□ 0.51
SYNE4-201ENST00000324444 TIMM44O43615 452 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 EPOP01588 193 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 CYP17A1P05093 508 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 ABHD2P08910 425 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 VASPP50552 380 aaPredicted RBP18.27■□□□□ 0.51
SYNE4-201ENST00000324444 ARF5P84085 180 aa18.27■□□□□ 0.51
SYNE4-201ENST00000324444 CDH17Q12864 832 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms