RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 KIAA0100Q14667 2235 aaKnown RBP15.44■□□□□ 0.06
VARS2-201ENST00000321897 TUBGCP6Q96RT7 1819 aa15.44■□□□□ 0.06
VARS2-201ENST00000321897 TRIM43BA6NCK2 446 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 AMHP03971 560 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 BPGMP07738 259 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 OR1E1P30953 314 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 CD86P42081 329 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 GRIA4P48058 902 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 SLC25A11Q02978 314 aaKnown RBP15.43■□□□□ 0.06
VARS2-201ENST00000321897 STX5Q13190 355 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 RAP1GAP2Q684P5 730 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 B3GNT9Q6UX72 402 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 ZNF567Q8N184 647 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 SYT11Q9BT88 431 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 STRA6Q9BX79 667 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 MRPS26Q9BYN8 205 aaKnown RBP15.43■□□□□ 0.06
VARS2-201ENST00000321897 TXLNGYQ9BZA5 131 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 PCDHGC3Q9UN70 934 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 PSMD13Q9UNM6 376 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 WEE1P30291 646 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 ADRA1BP35368 520 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 PBX3P40426 434 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 LILRA4P59901 499 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 ABCE1P61221 599 aaKnown RBP15.43■□□□□ 0.06
VARS2-201ENST00000321897 UBE3AQ05086 875 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 PPIL2Q13356 520 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 TMC5Q6UXY8 1006 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 C16orf59Q7L2K0 433 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 SETD3Q86TU7 594 aaPredicted RBP15.43■□□□□ 0.06
VARS2-201ENST00000321897 PLD3Q8IV08 490 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 DENND6AQ8IWF6 608 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 ZFYVE19Q96K21 471 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 CYP2S1Q96SQ9 504 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 GIMAP4Q9NUV9 329 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 EGFL7Q9UHF1 273 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 PPP2R3BQ9Y5P8 575 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 PSAT1Q9Y617 370 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 EP400Q96L91 3159 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 FAM95CA0A1B0GW59 222 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 HEATR9A2RTY3 570 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 CFAP99D6REC4 459 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 TIPRLO75663 272 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 ASLP04424 464 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 CCDC166P0CW27 439 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 ICAM3P32942 547 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 MPP1Q00013 466 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 SFSWAPQ12872 951 aaKnown RBP15.43■□□□□ 0.06
VARS2-201ENST00000321897 NOMO2Q5JPE7 1267 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 TMEM198Q66K66 360 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 AAGABQ6PD74 315 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 RPS27LQ71UM5 84 aaKnown RBP15.43■□□□□ 0.06
VARS2-201ENST00000321897 CIR1Q86X95 450 aaPredicted RBP15.43■□□□□ 0.06
VARS2-201ENST00000321897 ATAD1Q8NBU5 361 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 NOL11Q9H8H0 719 aaKnown RBP15.43■□□□□ 0.06
VARS2-201ENST00000321897 OLA1Q9NTK5 396 aaKnown RBP15.43■□□□□ 0.06
VARS2-201ENST00000321897 SLC15A5A6NIM6 579 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 ITM2AO43736 263 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 MFN2O95140 757 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 MMP3P08254 477 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 GRM5P41594 1212 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 NR2C2P49116 596 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 CLK1P49759 484 aaKnown RBP15.43■□□□□ 0.06
VARS2-201ENST00000321897 DGCR6Q14129 220 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 SPIDRQ14159 915 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 PLCL1Q15111 1095 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 C6orf183Q5T699 404 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 ZCCHC7Q8N3Z6 543 aaKnown RBP15.43■□□□□ 0.06
VARS2-201ENST00000321897 MAGEE2Q8TD90 523 aaPredicted RBP15.43■□□□□ 0.06
VARS2-201ENST00000321897 POMKQ9H5K3 350 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 PCDHA11Q9Y5I1 949 aa15.43■□□□□ 0.06
VARS2-201ENST00000321897 TIAM2Q8IVF5 1701 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 MYH4Q9Y623 1939 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 STX16-NPEPL1H3BU86 382 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 J3QRK9 145 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 SORBS2O94875 1100 aaKnown RBP15.42■□□□□ 0.06
VARS2-201ENST00000321897 F9P00740 461 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 DARSP14868 501 aaKnown RBP15.42■□□□□ 0.06
VARS2-201ENST00000321897 CDH3P22223 829 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 PSMA4P25789 261 aaKnown RBP15.42■□□□□ 0.06
VARS2-201ENST00000321897 CDC42EP1Q00587 391 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 KLF10Q13118 480 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 EGFLAMQ63HQ2 1017 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 NEPROQ6NW34 567 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 FAM35AQ86V20 835 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 PCYOX1LQ8NBM8 494 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 PHC3Q8NDX5 983 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.42■□□□□ 0.061e-7■■■■■ 35.3
VARS2-201ENST00000321897 FBXL8Q96CD0 374 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 GLT1D1Q96MS3 346 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 GPR63Q9BZJ6 419 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 BPIFA1Q9NP55 256 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 NCKIPSDQ9NZQ3 722 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 A0A087WXM4 84 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 ZBTB11O95625 1053 aaPredicted RBP15.42■□□□□ 0.06
VARS2-201ENST00000321897 CD151P48509 253 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 LHX1P48742 406 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 OR52E8Q6IFG1 317 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 DPY19L2P1Q6NXN4 242 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 ZNF410Q86VK4 478 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 ARMC7Q9H6L4 198 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms