RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 CYB5D2Q8WUJ1 264 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 SORCS1Q8WY21 1168 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 TADA1Q96BN2 335 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 SEMA3CQ99985 751 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 GORASP1Q9BQQ3 440 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 DPH5Q9H2P9 285 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 EIF2B3Q9NR50 452 aaKnown RBP13.8□□□□□ -0.2
PRPF18-201ENST00000320054 VPS45Q9NRW7 570 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 GOLGA6AQ9NYA3 693 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 GRHL1Q9NZI5 618 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 WNT16Q9UBV4 365 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRPF18-201ENST00000320054 AAR2Q9Y312 384 aaKnown RBP13.8□□□□□ -0.2
PRPF18-201ENST00000320054 FARP1Q9Y4F1 1045 aaPredicted RBP13.8□□□□□ -0.2
PRPF18-201ENST00000320054 V9GYY5 206 aaPredicted RBP13.8□□□□□ -0.2
PRPF18-201ENST00000320054 COL6A3P12111 3177 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 UNC80Q8N2C7 3258 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 SHISA7A6NL88 538 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 INSIG1O15503 277 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 IGSF6O95976 241 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 MMP2P08253 660 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 CHRM1P11229 460 aaPredicted RBP13.79□□□□□ -0.2
PRPF18-201ENST00000320054 KIR2DL1P43626 348 aaPredicted RBP13.79□□□□□ -0.2
PRPF18-201ENST00000320054 RGRP47804 291 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 GEMP55040 296 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 MAXP61244 160 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 AP1S1P61966 158 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 BASP1P80723 227 aaKnown RBP13.79□□□□□ -0.2
PRPF18-201ENST00000320054 DSC2Q02487 901 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 GRSF1Q12849 480 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRPF18-201ENST00000320054 MPP3Q13368 585 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 ENPP2Q13822 863 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 ZNF234Q14588 700 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 KCNJ11Q14654 390 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 KCTD19Q17RG1 926 aaPredicted RBP13.79□□□□□ -0.2
PRPF18-201ENST00000320054 FNDC3BQ53EP0 1204 aaKnown RBP13.79□□□□□ -0.2
PRPF18-201ENST00000320054 KCTD11Q693B1 232 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 HIBCHQ6NVY1 386 aaPredicted RBP13.79□□□□□ -0.2
PRPF18-201ENST00000320054 WDR93Q6P2C0 686 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 TPRG1Q6ZUI0 275 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 SRLQ86TD4 932 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 PRPF39Q86UA1 669 aaKnown RBP13.79□□□□□ -0.2
PRPF18-201ENST00000320054 SFTPA1Q8IWL2 248 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 NAT8LQ8N9F0 302 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 OR2AP1Q8NGE2 309 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 FAM3CQ92520 227 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 CPT1BQ92523 772 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 EZH1Q92800 747 aaPredicted RBP13.79□□□□□ -0.2
PRPF18-201ENST00000320054 ART4Q93070 314 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 OXNAD1Q96HP4 312 aaPredicted RBP13.79□□□□□ -0.2
PRPF18-201ENST00000320054 GDAP1L1Q96MZ0 367 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 TMEM245Q9H330 911 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 SCUBE2Q9NQ36 999 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 ANAPC5Q9UJX4 755 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 HCN2Q9UL51 889 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 SHOC2Q9UQ13 582 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 TTLL3Q9Y4R7 772 aa13.79□□□□□ -0.2
PRPF18-201ENST00000320054 ESYT3A0FGR9 886 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 WASH3PC4AMC7 463 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 E7EVH7 732 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 TP73O15350 636 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 SUN1O94901 812 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 AP2A1O95782 977 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 SERPINF2P08697 491 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 MCM3P25205 808 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 ITGA8P53708 1063 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 SKOR1P84550 965 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 TRADDQ15628 312 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 ACCSLQ4AC99 568 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 FBXO43Q4G163 708 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 CARD16Q5EG05 197 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 FAXCQ5TGI0 409 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 NCEH1Q6PIU2 408 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 KDELC1Q6UW63 502 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 TAB3Q8N5C8 712 aaPredicted RBP13.78□□□□□ -0.2
PRPF18-201ENST00000320054 MCUQ8NE86 351 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 SPATA22Q8NHS9 363 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRPF18-201ENST00000320054 EXOC2Q96KP1 924 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 RBM15Q96T37 977 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRPF18-201ENST00000320054 MLPHQ9BV36 600 aaPredicted RBP13.78□□□□□ -0.2
PRPF18-201ENST00000320054 FRMD8Q9BZ67 464 aaPredicted RBP13.78□□□□□ -0.2
PRPF18-201ENST00000320054 EPC1Q9H2F5 836 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 NOD2Q9HC29 1040 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 ARHGEF3Q9NR81 526 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 ZDHHC18Q9NUE0 388 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 SUN2Q9UH99 717 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 FAM153AQ9UHL3 310 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 MYLKQ15746 1914 aa13.78□□□□□ -0.2
PRPF18-201ENST00000320054 EDDM13A0A1B0GTR0 161 aa13.77□□□□□ -0.21
PRPF18-201ENST00000320054 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.77□□□□□ -0.21
PRPF18-201ENST00000320054 TTC34A8MYJ7 566 aa13.77□□□□□ -0.21
PRPF18-201ENST00000320054 POP4O95707 220 aaKnown RBP13.77□□□□□ -0.21
PRPF18-201ENST00000320054 EGFP01133 1207 aa13.77□□□□□ -0.21
PRPF18-201ENST00000320054 APRTP07741 180 aa13.77□□□□□ -0.21
PRPF18-201ENST00000320054 CD86P42081 329 aa13.77□□□□□ -0.21
PRPF18-201ENST00000320054 RECQLP46063 649 aaPredicted RBP13.77□□□□□ -0.21
PRPF18-201ENST00000320054 CARSP49589 748 aaKnown RBP13.77□□□□□ -0.21
PRPF18-201ENST00000320054 SCNN1BP51168 640 aa13.77□□□□□ -0.21
PRPF18-201ENST00000320054 TERF1P54274 439 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms