RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 HECTD3Q5T447 861 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 HACD2Q6Y1H2 254 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 EIF3MQ7L2H7 374 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 KIF18BQ86Y91 864 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CENPLQ8N0S6 344 aaPredicted RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 STK40Q8N2I9 435 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ACTL9Q8TC94 416 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 RNF25Q96BH1 459 aaPredicted RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 SLC45A3Q96JT2 553 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CDRT15Q96T59 188 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 EPB41L4AQ9HCS5 686 aaPredicted RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ZSCAN32Q9NX65 697 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 GDAP2Q9NXN4 497 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 MARCOQ9UEW3 520 aaPredicted RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 PRKAG3Q9UGI9 489 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 AGO2Q9UKV8 859 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 TMCC3Q9ULS5 477 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 SONP18583 2426 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 SLIT2O94813 1529 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CYP3A7-CYP3A51PA0A087WV96 503 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 FAM220BPB1ANY3 271 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 MDM4O15151 490 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 RGS10O43665 173 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 BCAS2O75934 225 aaPredicted RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 SERPINA1P01009 418 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CALCAP01258 141 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 SRPRAP08240 638 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 BGNP21810 368 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CYP3A7P24462 503 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 EIF2DP41214 584 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 STRIP1Q5VSL9 837 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 NEK5Q6P3R8 708 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CNSTQ6PJW8 725 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ZNF773Q6PK81 442 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 DPH6Q7L8W6 267 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ZNF605Q86T29 641 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 SLCO6A1Q86UG4 719 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 TBC1D19Q8N5T2 526 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 PHC3Q8NDX5 983 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 HAVCR1Q96D42 359 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 MCEEQ96PE7 176 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CPXM1Q96SM3 734 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CDK5RAP1Q96SZ6 601 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 DUSP9Q99956 384 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 MTG1Q9BT17 334 aaPredicted RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 PREBQ9HCU5 417 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CLEC11AQ9Y240 323 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 BCS1LQ9Y276 419 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 MAN2B2Q9Y2E5 1009 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 PCDHB12Q9Y5F1 795 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 PCDHA11Q9Y5I1 949 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ANAPC1Q9H1A4 1944 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 PLXNB2O15031 1838 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 UBA6A0AVT1 1052 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 TRIM64CA6NLI5 447 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 NOTOA8MTQ0 251 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 C5orf58C9J3I9 102 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 UBXN8O00124 270 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 GJA9P57773 515 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 POU4F1Q01851 419 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 BTKQ06187 659 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 TSTA3Q13630 321 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 MOGSQ13724 837 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 DPY19L1Q2PZI1 675 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 PABPC1LQ4VXU2 614 aaKnown RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 C10orf62Q5T681 223 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 N4BP2L1Q5TBK1 243 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 DDI2Q5TDH0 399 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 ARHGAP17Q68EM7 881 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 EIF5AL1Q6IS14 154 aaKnown RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 TTC7BQ86TV6 843 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 ITFG1Q8TB96 612 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 CENPIQ92674 756 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 RFT1Q96AA3 541 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 HEMGNQ9BXL5 484 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 NUSAP1Q9BXS6 441 aaKnown RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 EMILIN2Q9BXX0 1053 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 TMEM117Q9H0C3 514 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 SIAEQ9HAT2 523 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 GPN1Q9HCN4 374 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 ZDHHC18Q9NUE0 388 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 TBC1D13Q9NVG8 400 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 NYAP2Q9P242 653 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 PCDHGC3Q9UN70 934 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 GNEQ9Y223 722 aaKnown RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 PCDHA10Q9Y5I2 948 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 MARF1Q9Y4F3 1742 aaKnown RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 MRASO14807 208 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 LIASO43766 372 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 PRKD3O94806 890 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 SHBGP04278 402 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 BPGMP07738 259 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 CYP3A4P08684 503 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 RPS17P08708 135 aaKnown RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 ATP5F1P24539 256 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-201ENST00000317147 ZNF543Q08ER8 600 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 GRIK2Q13002 908 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 PRKG2Q13237 762 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 DGKDQ16760 1214 aa4.55□□□□□ -1.68
CNOT1-201ENST00000317147 KHDC1Q4VXA5 237 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms