RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 DDI1Q8WTU0 396 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 CCDC138Q96M89 665 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 STN1Q9H668 368 aaKnown RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 WDR55Q9H6Y2 383 aaPredicted RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 COG4Q9H9E3 785 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 HMX1Q9NP08 348 aaPredicted RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 MID1IP1Q9NPA3 183 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 SF3B1O75533 1304 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 hCG_2014768A0A024R1R8 64 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 TMEM114B3SHH9 223 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 F7P08709 466 aaPredicted RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 RAG1P15918 1043 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 PAX3P23760 479 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 GRK4P32298 578 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 OLIG2Q13516 323 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 LBRQ14739 615 aaKnown RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 ANGPTL8Q6UXH0 198 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 C16orf59Q7L2K0 433 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 EFL1Q7Z2Z2 1120 aaKnown RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 HDAC10Q969S8 669 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 EMID1Q96A84 441 aaPredicted RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 NTAN1Q96AB6 310 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 DCUN1D1Q96GG9 259 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 CLPTM1LQ96KA5 538 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 EXOC2Q96KP1 924 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 SIGLEC10Q96LC7 697 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 TEKT5Q96M29 485 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 KLHL4Q9C0H6 718 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 ZNF395Q9H8N7 513 aaPredicted RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 TAS2R13Q9NYV9 303 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 GMIPQ9P107 970 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 E7ESA3 106 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 E9PAM4 449 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 TLR5O60602 858 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 SEC24DO94855 1032 aaPredicted RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 HNRNPLP14866 589 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 TFEBP19484 476 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 SP3Q02447 781 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 GALNTL6Q49A17 601 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 NPY6RQ99463 290 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 CDH19Q9H159 772 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 ZNF358Q9NW07 568 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 FAM159BA6NKW6 160 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 SYCE1LA8MT33 242 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 HIST1H2AGP0C0S8 130 aaPredicted RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 TSPAN8P19075 237 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 HIST1H2ADP20671 130 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 MPSTP25325 297 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 CLCN5P51795 746 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 MPP1Q00013 466 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 PLIN5Q00G26 463 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 PRKD1Q15139 912 aaPredicted RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 NET1Q7Z628 596 aaPredicted RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 FBXO39Q8N4B4 442 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 UBR7Q8N806 425 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 HIST1H2AHQ96KK5 128 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 CDK5RAP1Q96SZ6 601 aaKnown RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 ZNF184Q99676 751 aaPredicted RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 HIST1H2AJQ99878 128 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 H2AFJQ9BTM1 129 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 RPL26L1Q9UNX3 145 aaKnown RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 SOCS7O14512 581 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 SEPT4O43236 478 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 VAV1P15498 845 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 FMO4P31512 558 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 TAF10Q12962 218 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 DYNC1I2Q13409 638 aaKnown RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 CAPRIN1Q14444 709 aaKnown RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 TMEM259Q4ZIN3 620 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 UGT3A1Q6NUS8 523 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 RINLQ6ZS11 566 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 PIWIL4Q7Z3Z4 852 aaKnown RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 RSPH1Q8WYR4 309 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 KCTD13Q8WZ19 329 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 ING2Q9H160 280 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 GTF2IRD1Q9UHL9 959 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 SNX13Q9Y5W8 968 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 WFS1O76024 890 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 URODP06132 367 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 CCNCP24863 283 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 GJA5P36382 358 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 PURAQ00577 322 aaKnown RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 KRT72Q14CN4 511 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 FUT11Q495W5 492 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 TMTC4Q5T4D3 741 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 GDF6Q6KF10 455 aaPredicted RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 MAMDC4Q6UXC1 1216 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 SLC24A5Q71RS6 500 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 SMOQ99835 787 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 MRPL57Q9BQC6 102 aaKnown RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 CADM1Q9BY67 442 aaKnown RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 MRPL9Q9BYD2 267 aaKnown RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 CLPBQ9H078 707 aa13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 TRMT13Q9NUP7 481 aaKnown RBP13.56□□□□□ -0.24
PCDHB9-201ENST00000316105 TK2O00142 265 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 ME2P23368 584 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 TUFMP49411 452 aaKnown RBP13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 SLC18A2Q05940 514 aa13.55□□□□□ -0.24
PCDHB9-201ENST00000316105 ESRP1Q6NXG1 681 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms