RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 DGKIO75912 1065 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 LHX1P48742 406 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 NR1H2P55055 460 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 GBE1Q04446 702 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 SLC9A4Q6AI14 798 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 SMYD5Q6GMV2 418 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 BNC2Q6ZN30 1099 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 DSELQ8IZU8 1212 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 BHLHE22Q8NFJ8 381 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 ADCY4Q8NFM4 1077 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 IRGQQ8WZA9 623 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 USP13Q92995 863 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 PCDHB12Q9Y5F1 795 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 CDH2P19022 906 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 MX2P20592 715 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 BDNFP23560 247 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 PIK3R1P27986 724 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 SESN2P58004 480 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 PPIDQ08752 370 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 SLC10A2Q12908 348 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 CYTH1Q15438 398 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 BSPRYQ5W0U4 402 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 DUS1LQ6P1R4 473 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 C16orf89Q6UX73 402 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 CMC1Q7Z7K0 106 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 FAM35AQ86V20 835 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 PYROXD2Q8N2H3 581 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 CCDC185Q8N715 623 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 KYQ8NBH2 561 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 NETO2Q8NC67 525 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 RSPH1Q8WYR4 309 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 SNRNP25Q9BV90 132 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 LRRC4Q9HBW1 653 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 TCF7L2Q9NQB0 619 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 CEPT1Q9Y6K0 416 aa17.43■□□□□ 0.38
SCAMP4-201ENST00000316097 NEMP1O14524 444 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 ALDH1A2O94788 518 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 HNRNPCP07910 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 OR1G1P47890 313 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 CCL23P55773 120 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 ZFP1Q6P2D0 407 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 GLB1LQ6UWU2 654 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 SLC26A9Q7LBE3 791 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 FAM131BQ86XD5 332 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 FAM126BQ8IXS8 530 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 B3GALT6Q96L58 329 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 HSFY1Q96LI6 401 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 ATP6V1G1O75348 118 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 GCATO75600 419 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 USP17L7P0C7H9 530 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 THRAP10827 490 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 PBX3P40426 434 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 MS4A2Q01362 244 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 ZNF423Q2M1K9 1284 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 STEAP4Q687X5 459 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 NAPRTQ6XQN6 538 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 TMEM86AQ8N2M4 240 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 MYLPFQ96A32 169 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 ATXN7L3BQ96GX2 97 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 ULBP1Q9BZM6 244 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 WDR55Q9H6Y2 383 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 SUDS3Q9H7L9 328 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 TXNDC16Q9P2K2 825 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 THEGQ9P2T0 379 aa17.42■□□□□ 0.38
SCAMP4-201ENST00000316097 LAMA3Q16787 3333 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 YJEFN3A6XGL0 299 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 ODC1P11926 461 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 ENO3P13929 434 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 SELPP16109 830 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 RPL34P49207 117 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 SULT2A1Q06520 285 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 IFRD2Q12894 506 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 USP41Q3LFD5 358 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 BOLA3Q53S33 107 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 BORAQ6PGQ7 559 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 DIS3LQ8TF46 1054 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 TBC1D13Q9NVG8 400 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 HEMK1Q9Y5R4 338 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 CYP2F1P24903 491 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 MGAT1P26572 445 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 NME3Q13232 169 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 INSCQ1MX18 579 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 PIGGQ5H8A4 983 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 C4orf22Q6V702 233 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 CYS1Q717R9 158 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 SIX6OS1Q8N1H7 587 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 PLD6Q8N2A8 252 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 TDRD5Q8NAT2 981 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 RCN3Q96D15 328 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 HSPBAP1Q96EW2 488 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 FERMT1Q9BQL6 677 aa17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 LIN28AQ9H9Z2 209 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCAMP4-201ENST00000316097 AMHP03971 560 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 GLDCP23378 1020 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 SEMA5AQ13591 1074 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 CEACAM7Q14002 265 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 PPP2R5DQ14738 602 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 NOMO2Q5JPE7 1267 aa17.4■□□□□ 0.38
SCAMP4-201ENST00000316097 OVOS1Q6IE37 1185 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms