RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 APOC4-APOC2K7ER74 178 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 APOC2P02655 101 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 PSEN1P49768 467 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 ABRAQ8N0Z2 381 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 VPS35Q96QK1 796 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 OR14I1A6ND48 311 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 DNAJA2O60884 412 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 MTTPP55157 894 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 ITGB3BPQ13352 177 aaPredicted RBP15.63■□□□□ 0.09
HCFC1-201ENST00000310441 CELF1Q92879 486 aaKnown RBP15.63■□□□□ 0.09
HCFC1-201ENST00000310441 BHMTQ93088 406 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 AK5Q9Y6K8 562 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 PRAMEF22A3QJZ6 481 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 FAM86C2PA6NEL3 165 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 GSSP48637 474 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 NRG3P56975 720 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 PGM2Q96G03 612 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 FTH1P02794 183 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 NR4A1P22736 598 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 ADAMTSL2Q86TH1 951 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 RMI1Q9H9A7 625 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 SCAF8Q9UPN6 1271 aaKnown RBP15.63■□□□□ 0.09
HCFC1-201ENST00000310441 PCDHA11Q9Y5I1 949 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 RGSL1A5PLK6 1076 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 ANXA5P08758 320 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 CCNYL3P0C7X3 344 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 LTKP29376 864 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 MYBPC1Q00872 1141 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 GRB14Q14449 540 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 FBXO25Q8TCJ0 367 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 HELQQ8TDG4 1101 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 RXFP2Q8WXD0 754 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 BORCS5Q969J3 196 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 C18orf25Q96B23 403 aaPredicted RBP15.63■□□□□ 0.09
HCFC1-201ENST00000310441 SENP6Q9GZR1 1112 aaPredicted RBP15.63■□□□□ 0.09
HCFC1-201ENST00000310441 MCM8Q9UJA3 840 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 FAM25EA8MYX2 175 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 UGT2B11O75310 529 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 RPL4P36578 427 aaKnown RBP15.62■□□□□ 0.09
HCFC1-201ENST00000310441 CLK2P49760 499 aaKnown RBP15.62■□□□□ 0.09
HCFC1-201ENST00000310441 BTN3A2P78410 334 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 FOXO4P98177 505 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 PABPC1LQ4VXU2 614 aaKnown RBP15.62■□□□□ 0.09
HCFC1-201ENST00000310441 ZNF410Q86VK4 478 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 HEXDCQ8WVB3 486 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 DPF2Q92785 391 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 KAT2BQ92831 832 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 SLC28A1O00337 649 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 ELK3P41970 407 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 GCNT1Q02742 428 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 TMEM86AQ8N2M4 240 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 PDPRQ8NCN5 879 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 FBXO10Q9UK96 956 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 TAS2R41P59536 307 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 ROR2Q01974 943 aaKnown RBP15.62■□□□□ 0.09
HCFC1-201ENST00000310441 RABL6Q3YEC7 729 aaPredicted RBP15.62■□□□□ 0.09
HCFC1-201ENST00000310441 DAGLAQ9Y4D2 1042 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 CCL15-CCL14A0A0B4J2E2 113 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 HMGCRP04035 888 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 PROCP04070 461 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 FOSL2P15408 326 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 ZNF37AP17032 561 aaPredicted RBP15.62■□□□□ 0.09
HCFC1-201ENST00000310441 CCL15Q16663 113 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 RASGEF1AQ8N9B8 481 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 ZMYM5Q9UJ78 669 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 MSH4O15457 936 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 TMC8Q8IU68 726 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 GPC6Q9Y625 555 aaPredicted RBP15.62■□□□□ 0.09
HCFC1-201ENST00000310441 ZNF780BQ9Y6R6 833 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 BBIP1A8MTZ0 92 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 SGPL1O95470 568 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 ATF6P18850 670 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 KBTBD7Q8WVZ9 684 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 MNDAP41218 407 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 TUFMP49411 452 aaKnown RBP15.62■□□□□ 0.09
HCFC1-201ENST00000310441 NKX1-1Q15270 411 aaPredicted RBP15.62■□□□□ 0.09
HCFC1-201ENST00000310441 NANOGNBQ7Z5D8 188 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 POC5Q8NA72 575 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 SELENOMQ8WWX9 145 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 FNDC11Q9BVV2 318 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 BAIAP2Q9UQB8 552 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 FAM50BQ9Y247 325 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 PCDHB5Q9Y5E4 795 aa15.62■□□□□ 0.09
HCFC1-201ENST00000310441 WRBO00258 174 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 THRBP10828 461 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 AP1S1P61966 158 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 USP41Q3LFD5 358 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 STYK1Q6J9G0 422 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 HIPK1Q86Z02 1210 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 KLHL23Q8NBE8 558 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 GMCL1P1Q8NEA9 526 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 CST11Q9H112 138 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 ARHGEF33A8MVX0 844 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 SNRPD1P62314 119 aaKnown RBP15.61■□□□□ 0.09
HCFC1-201ENST00000310441 MSANTD1Q6ZTZ1 278 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 KATNAL2Q8IYT4 538 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 PLEKHG4BQ96PX9 1271 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 SAMD4AQ9UPU9 718 aaKnown RBP15.61■□□□□ 0.09
HCFC1-201ENST00000310441 DHRS7Q9Y394 339 aa15.61■□□□□ 0.09
HCFC1-201ENST00000310441 PDE2AO00408 941 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms