RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 PGRMC1O00264 195 aaKnown RBP13.07□□□□□ -0.32
APTX-201ENST00000309615 KRIT1O00522 736 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 ZBTB24O43167 697 aaPredicted RBP13.07□□□□□ -0.32
APTX-201ENST00000309615 LIASO43766 372 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 ALDH1A2O94788 518 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 IL1BP01584 269 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 HLA-DQB2P05538 268 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 PTPN3P26045 913 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 CHRNA3P32297 505 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 SCNN1BP51168 640 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 METAP1P53582 386 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 NRLP54845 237 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 NSUN2Q08J23 767 aaKnown RBP eCLIP13.07□□□□□ -0.32
APTX-201ENST00000309615 SNX1Q13596 522 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 ANGPT1Q15389 498 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 POM121L1PQ3SYA9 428 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 ARSIQ5FYB1 569 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 RASSF3Q86WH2 238 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 CDKL3Q8IVW4 592 aaPredicted RBP13.07□□□□□ -0.32
APTX-201ENST00000309615 BBS5Q8N3I7 341 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 MAIP1Q8WWC4 291 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 SIPA1Q96FS4 1042 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 CAPZA3Q96KX2 299 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 AGAP3Q96P47 875 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 HEPHQ9BQS7 1158 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 AP1M1Q9BXS5 423 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 TPSD1Q9BZJ3 242 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 FBRSQ9HAH7 460 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 USP29Q9HBJ7 922 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 EBF1Q9UH73 591 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 IL36AQ9UHA7 158 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 WDFY4Q6ZS81 3184 aa13.07□□□□□ -0.32
APTX-201ENST00000309615 BCLAF3A2AJT9 711 aaKnown RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 ALOX15BO15296 676 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 RNASEH1O60930 286 aaKnown RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 LEFTY1O75610 366 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 NEBLO76041 1014 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 POP4O95707 220 aaKnown RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 CR2P20023 1033 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 PSMD8P48556 350 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 ITKQ08881 620 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 CST6Q15828 149 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 TEX44Q53QW1 395 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 ZNF776Q68DI1 518 aaPredicted RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 KIAA1324Q6UXG2 1013 aaKnown RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 SRLQ86TD4 932 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 CREG2Q8IUH2 290 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 PRCCQ92733 491 aaPredicted RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 NSMCE3Q96MG7 304 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 TMEM121Q9BTD3 319 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 FRMD8P1Q9BZ68 369 aaPredicted RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 CD93Q9NPY3 652 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 FBXO4Q9UKT5 387 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 ATP8A1Q9Y2Q0 1164 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 MID1O15344 667 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 KCNN4O15554 427 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 MTSS1O43312 755 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 C7P10643 843 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 HOXA6P31267 233 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 HSPA9P38646 679 aaKnown RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 CSNK1DP48730 415 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 BYSLQ13895 437 aaKnown RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 OASLQ15646 514 aaKnown RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 CCNG2Q16589 344 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 DSG4Q86SJ6 1040 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 PRELID2Q8N945 189 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 FAM71DQ8N9W8 422 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 PIP4K2CQ8TBX8 421 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 NKD2Q969F2 451 aaPredicted RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 NUDCD1Q96RS6 583 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 NAP1L3Q99457 506 aaPredicted RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 POLR1EQ9GZS1 481 aaKnown RBP13.06□□□□□ -0.32
APTX-201ENST00000309615 NOD2Q9HC29 1040 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 AMACRQ9UHK6 382 aa13.06□□□□□ -0.32
APTX-201ENST00000309615 PLK4O00444 970 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 KPNA3O00505 521 aaPredicted RBP13.05□□□□□ -0.32
APTX-201ENST00000309615 PIGNO95427 931 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 PRNPP04156 253 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 SLC8A1P32418 973 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 FNTBP49356 437 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 NUBP1P53384 320 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 GDF10P55107 478 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 DSC2Q02487 901 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 IHHQ14623 411 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 ALG1LQ6GMV1 187 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 ZNF567Q8N184 647 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 TMIEQ8NEW7 156 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 ARRDC2Q8TBH0 407 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 ZNF592Q92610 1267 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 TEKT5Q96M29 485 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 SEMA3CQ99985 751 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 CPEB1Q9BZB8 566 aaKnown RBP13.05□□□□□ -0.32
APTX-201ENST00000309615 SCUBE2Q9NQ36 999 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 SERGEFQ9UGK8 458 aa13.05□□□□□ -0.32
APTX-201ENST00000309615 PDE2AO00408 941 aaPredicted RBP13.04□□□□□ -0.32
APTX-201ENST00000309615 AXIN1O15169 862 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 ADH1BP00325 375 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 UGT2B4P06133 528 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 SP9P0CG40 484 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms