RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 KRT81Q14533 505 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 TRIP10Q15642 601 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 BOLA3Q53S33 107 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 PDPK2PQ6A1A2 396 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 DCLRE1AQ6PJP8 1040 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 MAVSQ7Z434 540 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 CDKL3Q8IVW4 592 aaPredicted RBP10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 ABI1Q8IZP0 508 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 PQLC3Q8N755 202 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 POU5F2Q8N7G0 328 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 NETO2Q8NC67 525 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 TBCBQ99426 244 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 SORT1Q99523 831 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 ULBP1Q9BZM6 244 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 ATP11BQ9Y2G3 1177 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 FAM32AQ9Y421 112 aaKnown RBP10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 PCDHB7Q9Y5E2 793 aa10.48□□□□□ -0.73
APOBEC3F-201ENST00000308521 FRMPD3Q5JV73 1810 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 YJEFN3A6XGL0 299 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 LYPLA1O75608 230 aaPredicted RBP10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 ETS2P15036 469 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 FDFT1P37268 417 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 CCT8P50990 548 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 ARPC4P59998 168 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 RPL10AP62906 217 aaKnown RBP10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 NME3Q13232 169 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 LRRC36Q1X8D7 754 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 N4BP2L1Q5TBK1 243 aaPredicted RBP10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 FAXCQ5TGI0 409 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 SDHAF4Q5VUM1 108 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 SLC39A5Q6ZMH5 540 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 NANOGNBQ7Z5D8 188 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 SATL1Q86VE3 508 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 METTL23Q86XA0 190 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 FAM131BQ86XD5 332 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 COLGALT2Q8IYK4 626 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 DEFB107AQ8IZN7 70 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 SIX6OS1Q8N1H7 587 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 ARL10Q8N8L6 244 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 TFB1MQ8WVM0 346 aaKnown RBP10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 EDEM1Q92611 657 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 ATP2A3Q93084 1043 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 PGLYRP2Q96PD5 576 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 RTKNQ9BST9 563 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 Q9H521 79 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 WBP1LQ9NX94 342 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 ARHGEF38Q9NXL2 777 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 CDH9Q9ULB4 789 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 RAB26Q9ULW5 256 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 PSMD13Q9UNM6 376 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 DTNAQ9Y4J8 743 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 hCG_2014768A0A024R1R8 64 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 C15orf38-AP3S2A0A0A6YYH1 394 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 STK25O00506 426 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 DPYSL4O14531 572 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 TADA2AO75478 443 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 CYP2F1P24903 491 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 SERPINB6P35237 376 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 ARPP19P56211 112 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 NIPAL4Q0D2K0 466 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 TBL3Q12788 808 aaKnown RBP10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 PCLAFQ15004 111 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 FSCBQ5H9T9 825 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 FAM117BQ6P1L5 589 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 FBXL19Q6PCT2 694 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 DHRS4L2Q6PKH6 230 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 TMC7Q7Z402 723 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 ARPINQ7Z6K5 226 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 PYROXD2Q8N2H3 581 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 CCDC185Q8N715 623 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 SCAMP5Q8TAC9 235 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 URGCPQ8TCY9 931 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 HSFY1Q96LI6 401 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 QPCTLQ9NXS2 382 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 ARHGAP26Q9UNA1 814 aa10.47□□□□□ -0.73
APOBEC3F-201ENST00000308521 M0QZQ0 153 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 STK10O94804 968 aaKnown RBP10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 MLNP12872 115 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 COX4I1P13073 169 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 PCSK1P29120 753 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 ALDH1A3P47895 512 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 ABCE1P61221 599 aaKnown RBP10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 YWHAHQ04917 246 aaPredicted RBP10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 DSC1Q08554 894 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 ZBTB17Q13105 803 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 METTL21CQ5VZV1 264 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 SLC26A9Q7LBE3 791 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 TMEM173Q86WV6 379 aaPredicted RBP10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 MPP5Q8N3R9 675 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 CATSPER1Q8NEC5 780 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 TRPC4APQ8TEL6 797 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 CASP10Q92851 521 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 SNRNP25Q9BV90 132 aaKnown RBP10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 PNPOQ9NVS9 261 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 TMEM161AQ9NX61 479 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 LRFN2Q9ULH4 789 aa10.46□□□□□ -0.73
APOBEC3F-201ENST00000308521 VILLO15195 856 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms