RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 SNX10Q9Y5X0 201 aa14.4□□□□□ -0.1
RAB40A-201ENST00000304236 POU3F3P20264 500 aaPredicted RBP14.39□□□□□ -0.11
RAB40A-201ENST00000304236 BDNFP23560 247 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 NMBRP28336 390 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 HOXC13P31276 330 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 THPOP40225 353 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 CSRP3P50461 194 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 GEMP55040 296 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 EIF4EBP2Q13542 120 aaPredicted RBP14.39□□□□□ -0.11
RAB40A-201ENST00000304236 PKN3Q6P5Z2 889 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 TRAF7Q6Q0C0 670 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 ADGRG6Q86SQ4 1221 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 KIRREL3Q8IZU9 778 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 ATPAF2Q8N5M1 289 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 DTX3LQ8TDB6 740 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 AZIN2Q96A70 460 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 ATXN7L3BQ96GX2 97 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 UROC1Q96N76 676 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 ASB2Q96Q27 587 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 TBL1YQ9BQ87 522 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 OSBPL1AQ9BXW6 950 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 ILKAPQ9H0C8 392 aaPredicted RBP14.39□□□□□ -0.11
RAB40A-201ENST00000304236 MRM3Q9HC36 420 aaKnown RBP14.39□□□□□ -0.11
RAB40A-201ENST00000304236 ABCC13Q9NSE7 274 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 OXSMQ9NWU1 459 aa14.39□□□□□ -0.11
RAB40A-201ENST00000304236 FNDC1Q4ZHG4 1894 aaPredicted RBP14.39□□□□□ -0.11
RAB40A-201ENST00000304236 A0A088AWK7 358 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 A6NHS1 94 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 M0QZQ0 153 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 RFXAPO00287 272 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 CCNT2O60583 730 aaKnown RBP14.38□□□□□ -0.11
RAB40A-201ENST00000304236 CHRNA1P02708 482 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 TPH1P17752 444 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 ARRB2P32121 409 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 AFF1P51825 1210 aaKnown RBP14.38□□□□□ -0.11
RAB40A-201ENST00000304236 MGAT3Q09327 533 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 SMAD1Q15797 465 aaKnown RBP14.38□□□□□ -0.11
RAB40A-201ENST00000304236 RWDD4Q6NW29 188 aaKnown RBP14.38□□□□□ -0.11
RAB40A-201ENST00000304236 ZYG11AQ6WRX3 759 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 RAPH1Q70E73 1250 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 ZC3HC1Q86WB0 502 aaKnown RBP14.38□□□□□ -0.11
RAB40A-201ENST00000304236 LRRC49Q8IUZ0 686 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 CNTN4Q8IWV2 1026 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 MICAL1Q8TDZ2 1067 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 CELF6Q96J87 481 aaKnown RBP14.38□□□□□ -0.11
RAB40A-201ENST00000304236 IL12RB2Q99665 862 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 APOL2Q9BQE5 337 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 FAM167BQ9BTA0 163 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 GLOD4Q9HC38 313 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 DONSONQ9NYP3 566 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 SLC39A10Q9ULF5 831 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 UNC80Q8N2C7 3258 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 TET1Q8NFU7 2136 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 MATN3O15232 486 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 IRAK2O43187 625 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 ANPEPP15144 967 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 NCF2P19878 526 aaPredicted RBP14.38□□□□□ -0.11
RAB40A-201ENST00000304236 DEFB103AP81534 67 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 TSPY1Q01534 308 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 ASPHQ12797 758 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 SLC12A1Q13621 1099 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 LBRQ14739 615 aaKnown RBP14.38□□□□□ -0.11
RAB40A-201ENST00000304236 GRM3Q14832 879 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 LIPMQ5VYY2 423 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 BTBD8Q5XKL5 378 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 TIGD7Q6NT04 549 aaPredicted RBP14.38□□□□□ -0.11
RAB40A-201ENST00000304236 POTEHQ6S545 545 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 ATG14Q6ZNE5 492 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 CNTD1Q8N815 330 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 TDRD5Q8NAT2 981 aaKnown RBP14.38□□□□□ -0.11
RAB40A-201ENST00000304236 PPHLN1Q8NEY8 458 aaKnown RBP14.38□□□□□ -0.11
RAB40A-201ENST00000304236 ACTRT2Q8TDY3 377 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 PKMYT1Q99640 499 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 GATA5Q9BWX5 397 aaPredicted RBP14.38□□□□□ -0.11
RAB40A-201ENST00000304236 COG4Q9H9E3 785 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 CAB39LQ9H9S4 337 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 ENTPD7Q9NQZ7 604 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 NDE1Q9NXR1 346 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 FNIP2Q9P278 1114 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 RAP2CQ9Y3L5 183 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 MTCH2Q9Y6C9 303 aa14.38□□□□□ -0.11
RAB40A-201ENST00000304236 CDH23Q9H251 3354 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 SLCO1B7G3V0H7 640 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 DFFAO00273 331 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 B3GAT3O94766 335 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 CTSHP09668 335 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 CCR1P32246 355 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 SLC25A3Q00325 362 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 IRF9Q00978 393 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 BTKQ06187 659 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 GRIK3Q13003 919 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 USP10Q14694 798 aaKnown RBP14.37□□□□□ -0.11
RAB40A-201ENST00000304236 MBTPS1Q14703 1052 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 PPP2R5DQ14738 602 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 CAPRIN2Q6IMN6 1127 aaKnown RBP14.37□□□□□ -0.11
RAB40A-201ENST00000304236 PGM2L1Q6PCE3 622 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 OTOP3Q7RTS5 596 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 ARHGAP12Q8IWW6 846 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 ZNF781Q8N8C0 355 aa14.37□□□□□ -0.11
RAB40A-201ENST00000304236 JADE3Q92613 823 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms