RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 AP3M1Q9Y2T2 418 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 TCRBV9S1A1TA0A576 114 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 H0YC42 278 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 EIF2B2P49770 351 aaKnown RBP14.08□□□□□ -0.16
PRKCB-201ENST00000303531 ZNF57Q68EA5 555 aaPredicted RBP14.08□□□□□ -0.16
PRKCB-201ENST00000303531 DHDDSQ86SQ9 333 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 MSL3Q8N5Y2 521 aaKnown RBP14.08□□□□□ -0.16
PRKCB-201ENST00000303531 USP7Q93009 1102 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 RAD21L1Q9H4I0 556 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 ASB8Q9H765 288 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 BMP10O95393 424 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 RPN2P04844 631 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 ITGB5P18084 799 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 ST13P50502 369 aaKnown RBP14.08□□□□□ -0.16
PRKCB-201ENST00000303531 CRELD2Q6UXH1 353 aaPredicted RBP14.08□□□□□ -0.16
PRKCB-201ENST00000303531 GPC2Q8N158 579 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 C12orf29Q8N999 325 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 TEKT5Q96M29 485 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 CENPXA8MT69 81 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 SERPINA6P08185 405 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 ANPEPP15144 967 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 CRATP43155 626 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 CYP2A13Q16696 494 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 MACC1Q6ZN28 852 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 C15orf52Q6ZUT6 534 aaKnown RBP14.08□□□□□ -0.16
PRKCB-201ENST00000303531 TRAPPC5Q8IUR0 188 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 SPATA6LQ8N4H0 392 aa14.08□□□□□ -0.16
PRKCB-201ENST00000303531 MRPL57Q9BQC6 102 aaKnown RBP14.08□□□□□ -0.16
PRKCB-201ENST00000303531 A0A1W2PPM1 405 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 RNF225M0QZC1 329 aaPredicted RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 BIRC5O15392 142 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 HOXC6P09630 235 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 SLURP2P0DP57 97 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 IRF8Q02556 426 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 HSPA14Q0VDF9 509 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 PPIL2Q13356 520 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 ARSHQ5FYA8 562 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 GATAD2AQ86YP4 633 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 MECRQ9BV79 373 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 ZMYND8Q9ULU4 1186 aaPredicted RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 TSPAN19P0C672 248 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 PBX1P40424 430 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 ABL2P42684 1182 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 KCTD21Q4G0X4 260 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 CYP20A1Q6UW02 462 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 CCDC149Q6ZUS6 474 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 MLPHQ9BV36 600 aaPredicted RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 PHACTR1Q9C0D0 580 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 GNPTGQ9UJJ9 305 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 BTRCQ9Y297 605 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 RAP2CQ9Y3L5 183 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 SPATA31D1Q6ZQQ2 1576 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 MANSC4A6NHS7 340 aaPredicted RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 B4GALT5O43286 388 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 PREPLQ4J6C6 727 aaPredicted RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 INO80DQ53TQ3 878 aaPredicted RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 B3GNT6Q6ZMB0 384 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 ZYG11BQ9C0D3 744 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 BPIFA1Q9NP55 256 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 TMEM216Q9P0N5 145 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 SMIM31A0A1B0GVY4 71 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 MOXD2PA6NHM9 499 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 SMIM10L2AP0DMW4 78 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 SMIM10L2BP0DMW5 78 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 VAV1P15498 845 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 COL9A3Q14050 684 aaPredicted RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 C11orf88Q6PI97 169 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 DET1Q7L5Y6 550 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 NOL6Q9H6R4 1146 aaKnown RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 TMEM131LA2VDJ0 1609 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 PNMA8CA0A1B0GUJ8 204 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 FFAR3O14843 346 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 GPR42O15529 346 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 NTRK1P04629 796 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 GABRB2P47870 512 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 MARSP56192 900 aaKnown RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 PDK3Q15120 406 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 FNDC3BQ53EP0 1204 aaKnown RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 PAGE2BQ5JRK9 111 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 C10orf107Q8IVU9 208 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 PIK3R5Q8WYR1 880 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 SNX15Q9NRS6 342 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 SNX6Q9UNH7 406 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 ALOX15BO15296 676 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 HDAC3O15379 428 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 NDUFB5O43674 189 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 LYPLA1O75608 230 aaPredicted RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 MLYCDO95822 493 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 AFTPHQ6ULP2 937 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 RP9Q8TA86 221 aaKnown RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 MYLPFQ96A32 169 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 ERLEC1Q96DZ1 483 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 LEF1Q9UJU2 399 aaPredicted RBP14.07□□□□□ -0.16
PRKCB-201ENST00000303531 C2CD2Q9Y426 696 aa14.07□□□□□ -0.16
PRKCB-201ENST00000303531 MROH1Q8NDA8 1641 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 TRIM38O00635 465 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 EPHA3P29320 983 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 NUP62P37198 522 aaPredicted RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 POLD2P49005 469 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 ZIK1Q3SY52 487 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms