RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PGRMC1O00264 195 aaKnown RBP24.82■■□□□ 1.56
HOXC9-201ENST00000303450 ZNF185O15231 689 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 DNTTP04053 509 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 PRNPP04156 253 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 ACADMP11310 421 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 RBL1P28749 1068 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 RGRP47804 291 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 PSMD8P48556 350 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 SCNN1BP51168 640 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 ITKQ08881 620 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 ZBTB17Q13105 803 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 FAM46CQ5VWP2 391 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 ZSCAN30Q86W11 494 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 PGBD5Q8N414 524 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 C1orf54Q8WWF1 131 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 ATG4AQ8WYN0 398 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 ZNF419Q96HQ0 510 aaPredicted RBP24.82■■□□□ 1.56
HOXC9-201ENST00000303450 IL12RB2Q99665 862 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 MGME1Q9BQP7 344 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 TPSD1Q9BZJ3 242 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 C10orf88Q9H8K7 445 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 PPM1HQ9ULR3 514 aa24.82■■□□□ 1.56
HOXC9-201ENST00000303450 C1QTNF3-AMACRE9PGA6 284 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 AXIN1O15169 862 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 CTSLP07711 333 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 TDGF1P13385 188 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 CSNK1DP48730 415 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 NRLP54845 237 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 MAXP61244 160 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 ZBTB16Q05516 673 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 DMWDQ09019 674 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 CST6Q15828 149 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 ARSIQ5FYB1 569 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 SRLQ86TD4 932 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 TMIEQ8NEW7 156 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 SLC35B2Q8TB61 432 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 PIP4K2CQ8TBX8 421 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 ACTRT1Q8TDG2 376 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 CEP41Q9BYV8 373 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 POLR1EQ9GZS1 481 aaKnown RBP24.81■■□□□ 1.56
HOXC9-201ENST00000303450 DNPEPQ9ULA0 475 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 WASF2Q9Y6W5 498 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 BCLAF3A2AJT9 711 aaKnown RBP24.81■■□□□ 1.56
HOXC9-201ENST00000303450 LEFTY1O75610 366 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 ZNF189O75820 626 aaPredicted RBP24.81■■□□□ 1.56
HOXC9-201ENST00000303450 ADH1BP00325 375 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 HLA-DQB2P05538 268 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 PTPN3P26045 913 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 GKP32189 559 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 SLC8A1P32418 973 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 SIX1Q15475 284 aaPredicted RBP24.81■■□□□ 1.56
HOXC9-201ENST00000303450 TEX44Q53QW1 395 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 LRIG1Q96JA1 1093 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 AGAP3Q96P47 875 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 FAM126AQ9BYI3 521 aaPredicted RBP24.81■■□□□ 1.56
HOXC9-201ENST00000303450 SCUBE2Q9NQ36 999 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 SARDHQ9UL12 918 aa24.81■■□□□ 1.56
HOXC9-201ENST00000303450 CCDC163A0A0D9SF12 145 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 MID1O15344 667 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 INSIG1O15503 277 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 KCNN4O15554 427 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 LIASO43766 372 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 MAPK8P45983 427 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 FNTBP49356 437 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 BYSLQ13895 437 aaKnown RBP24.8■■□□□ 1.56
HOXC9-201ENST00000303450 GRM3Q14832 879 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 ZNF528Q3MIS6 628 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 TTC31Q49AM3 519 aaPredicted RBP24.8■■□□□ 1.56
HOXC9-201ENST00000303450 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.8■■□□□ 1.56
HOXC9-201ENST00000303450 NUDCD1Q96RS6 583 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 VAT1Q99536 393 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 PRRX2Q99811 253 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 HOMER3Q9NSC5 361 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 SMARCAL1Q9NZC9 954 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 SCML1Q9UN30 329 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 ATP8A1Q9Y2Q0 1164 aa24.8■■□□□ 1.56
HOXC9-201ENST00000303450 TTC24A2A3L6 582 aaPredicted RBP24.79■■□□□ 1.56
HOXC9-201ENST00000303450 RNF103O00237 685 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 KPNA3O00505 521 aaPredicted RBP24.79■■□□□ 1.56
HOXC9-201ENST00000303450 STK10O94804 968 aaKnown RBP24.79■■□□□ 1.56
HOXC9-201ENST00000303450 TUBB4AP04350 444 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 SP9P0CG40 484 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 C5AR1P21730 350 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 AP1S1P61966 158 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 WASHC5Q12768 1159 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 SNX1Q13596 522 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 CCNG2Q16589 344 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 POM121L1PQ3SYA9 428 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 CNTD1Q8N815 330 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 CAPZA3Q96KX2 299 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 SEMA3CQ99985 751 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 OSBPL1AQ9BXW6 950 aa24.79■■□□□ 1.56
HOXC9-201ENST00000303450 CPEB1Q9BZB8 566 aaKnown RBP24.79■■□□□ 1.56
HOXC9-201ENST00000303450 PABPC3Q9H361 631 aaKnown RBP24.79■■□□□ 1.56
HOXC9-201ENST00000303450 KLHL8Q9P2G9 620 aaPredicted RBP24.79■■□□□ 1.56
HOXC9-201ENST00000303450 KIF2AO00139 706 aaPredicted RBP24.78■■□□□ 1.56
HOXC9-201ENST00000303450 GJB3O75712 270 aa24.78■■□□□ 1.56
HOXC9-201ENST00000303450 C7P10643 843 aa24.78■■□□□ 1.56
HOXC9-201ENST00000303450 CR2P20023 1033 aa24.78■■□□□ 1.56
HOXC9-201ENST00000303450 CES1P23141 567 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms