RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CCDC189A1A4V9 331 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 C17orf102A2RUQ5 167 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 BTN3A1O00481 513 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 F9P00740 461 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 ALDOAP04075 364 aaKnown RBP13.45□□□□□ -0.26
CASC4-201ENST00000299957 PRKCGP05129 697 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 IQCF3P0C7M6 154 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 GGT5P36269 586 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 LIPMQ5VYY2 423 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 TTC30BQ8N4P2 665 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 C20orf27Q9GZN8 174 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 FZD8Q9H461 694 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 GALNT8Q9NY28 637 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 NDUFAF1Q9Y375 327 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 PHRF1Q9P1Y6 1649 aaKnown RBP13.45□□□□□ -0.26
CASC4-201ENST00000299957 RRN3P2A6NIE6 340 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 GLP2RO95838 553 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 RPL5P46777 297 aaKnown RBP13.45□□□□□ -0.26
CASC4-201ENST00000299957 CDK7P50613 346 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 USP46P62068 366 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 SLC39A12Q504Y0 691 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 RAP1GAP2Q684P5 730 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 LRRC8BQ6P9F7 803 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 PAOXQ6QHF9 649 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 TLK2Q86UE8 772 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 RNF217Q8TC41 542 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 FBXO32Q969P5 355 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 SKA1Q96BD8 255 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 FCRL2Q96LA5 508 aaPredicted RBP13.45□□□□□ -0.26
CASC4-201ENST00000299957 GID8Q9NWU2 228 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 MORF4L1Q9UBU8 362 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 SLC2A6Q9UGQ3 507 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 MYRFQ9Y2G1 1151 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 SLC27A5Q9Y2P5 690 aa13.45□□□□□ -0.26
CASC4-201ENST00000299957 TDRKHQ9Y2W6 561 aaKnown RBP13.45□□□□□ -0.26
CASC4-201ENST00000299957 USP2O75604 605 aaPredicted RBP13.44□□□□□ -0.26
CASC4-201ENST00000299957 NCK1P16333 377 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 WNT3AP56704 352 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 RAB10P61026 200 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 TIGD2Q4W5G0 525 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 ATP6AP1LQ52LC2 224 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 RALGPS2Q86X27 583 aaPredicted RBP13.44□□□□□ -0.26
CASC4-201ENST00000299957 CDYL2Q8N8U2 506 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 LPCAT1Q8NF37 534 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 ZMAT2Q96NC0 199 aaKnown RBP13.44□□□□□ -0.26
CASC4-201ENST00000299957 COLEC11Q9BWP8 271 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 GBA2Q9HCG7 927 aaPredicted RBP13.44□□□□□ -0.26
CASC4-201ENST00000299957 SCHIP1Q9P0W5 487 aaPredicted RBP13.44□□□□□ -0.26
CASC4-201ENST00000299957 KIF17Q9P2E2 1029 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 FAM72CH0Y354 149 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 SYNCRIPO60506 623 aaKnown RBP13.44□□□□□ -0.26
CASC4-201ENST00000299957 ITGAXP20702 1163 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 XPAP23025 273 aaPredicted RBP13.44□□□□□ -0.26
CASC4-201ENST00000299957 FASP25445 335 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 PTPN3P26045 913 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 FAM72AQ5TYM5 149 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 FAM72DQ6L9T8 149 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 MRNIPQ6NTE8 343 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 PLPPR4Q7Z2D5 763 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 FAM72BQ86X60 149 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 HERC6Q8IVU3 1022 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 SNX19Q92543 992 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 MTG1Q9BT17 334 aaPredicted RBP13.44□□□□□ -0.26
CASC4-201ENST00000299957 POLR1BQ9H9Y6 1135 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 FBRSL1Q9HCM7 1045 aaKnown RBP13.44□□□□□ -0.26
CASC4-201ENST00000299957 TBC1D23Q9NUY8 699 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 LNPEPQ9UIQ6 1025 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 PSMD13Q9UNM6 376 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 PKD1L3Q7Z443 1732 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 ZNF682O95780 498 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 SLC44A4Q53GD3 710 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 TEX44Q53QW1 395 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 NCBP2-AS2Q69YL0 99 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 B3GNT6Q6ZMB0 384 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 C2orf69Q8N8R5 385 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 HSFY1Q96LI6 401 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 GMLQ99445 158 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 ZFP14Q9HCL3 533 aa13.44□□□□□ -0.26
CASC4-201ENST00000299957 SIX3O95343 332 aaPredicted RBP13.43□□□□□ -0.26
CASC4-201ENST00000299957 SMIM10L2AP0DMW4 78 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 SMIM10L2BP0DMW5 78 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 MAGP20916 626 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 YAP1P46937 504 aaKnown RBP13.43□□□□□ -0.26
CASC4-201ENST00000299957 CNSTQ6PJW8 725 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 GFM2Q969S9 779 aaKnown RBP13.43□□□□□ -0.26
CASC4-201ENST00000299957 DACT3Q96B18 629 aaPredicted RBP13.43□□□□□ -0.26
CASC4-201ENST00000299957 QKIQ96PU8 341 aaKnown RBP eCLIP13.43□□□□□ -0.262e-7■■■□□ 15.2
CASC4-201ENST00000299957 KCTD14Q9BQ13 255 aaPredicted RBP13.43□□□□□ -0.26
CASC4-201ENST00000299957 ZDHHC2Q9UIJ5 367 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 TIAM2Q8IVF5 1701 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 HACD1B0YJ81 288 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 SNRPB2P08579 225 aaKnown RBP13.43□□□□□ -0.26
CASC4-201ENST00000299957 ZBTB48P10074 688 aaPredicted RBP13.43□□□□□ -0.26
CASC4-201ENST00000299957 YWHAQP27348 245 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 NPY2RP49146 381 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 SLC18A2Q05940 514 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 LRRC74AQ0VAA2 488 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 PWP1Q13610 501 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 PTPRCAPQ14761 206 aa13.43□□□□□ -0.26
CASC4-201ENST00000299957 PERM1Q5SV97 790 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms