RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CYBBP04839 570 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 ATP1A1P05023 1023 aaKnown RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 APODP05090 189 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 DCNP07585 359 aaKnown RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 RHOCP08134 193 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 PECAM1P16284 738 aaPredicted RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 DESP17661 470 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 OR1E1P30953 314 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 HTR7P34969 479 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 PTPN7P35236 360 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 GRIA2P42262 883 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 MAPKAPK2P49137 400 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 DNA2P51530 1060 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 ARF5P84085 180 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 INSM1Q01101 510 aaPredicted RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 GNA12Q03113 381 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 GBE1Q04446 702 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 HYAL2Q12891 473 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 KLF1Q13351 362 aaPredicted RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 ZNF177Q13360 481 aaPredicted RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 SERINC3Q13530 473 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 CDH18Q13634 790 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 ENPP2Q13822 863 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 KRT81Q14533 505 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 PAFAH1B3Q15102 231 aaKnown RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 PDK2Q15119 407 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 SIX1Q15475 284 aaPredicted RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 HS1BP3Q53T59 392 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 DGKKQ5KSL6 1271 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 ACBD5Q5T8D3 534 aaPredicted RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 MBLAC2Q68D91 279 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 LRRC31Q6UY01 552 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 ZNF852Q6ZMS4 543 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 PEX26Q7Z412 305 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 SETD3Q86TU7 594 aaPredicted RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 VSIG1Q86XK7 387 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 TXLNBQ8N3L3 684 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 ZNF366Q8N895 744 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 TMEM105Q8N8V8 129 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 KCTD6Q8NC69 237 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 EXD1Q8NHP7 514 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 FBF1Q8TES7 1133 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 USP33Q8TEY7 942 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 HMCESQ96FZ2 354 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 MSANTD3Q96H12 275 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 NSMCE3Q96MG7 304 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 RNF157Q96PX1 679 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 XPO6Q96QU8 1125 aaKnown RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 CALN1Q9BXU9 219 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 SLC39A8Q9C0K1 460 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 MTG2Q9H4K7 406 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 PDFQ9HBH1 243 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 DDX56Q9NY93 547 aaKnown RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 DTLQ9NZJ0 730 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 DEC1Q9P2X7 70 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 THAP10Q9P2Z0 257 aaPredicted RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 SAE1Q9UBE0 346 aaPredicted RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 VPS51Q9UID3 782 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 R3HDM2Q9Y2K5 976 aaKnown RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 ZKSCAN5Q9Y2L8 839 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 PLXNB3Q9ULL4 1909 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 GPR179Q6PRD1 2367 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 ADAMTS9Q9P2N4 1935 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 CCDC66A2RUB6 948 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 MIF4GDA9UHW6 222 aaKnown RBP6.02□□□□□ -1.45
SSX3-201ENST00000298396 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.02□□□□□ -1.45
SSX3-201ENST00000298396 J3KR12 359 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 K7ERQ8 282 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 SGK1O00141 431 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 RNF103O00237 685 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 MAN2B1O00754 1011 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 ALADP13716 330 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 HLA-EP13747 358 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 VAV1P15498 845 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 AOC1P19801 751 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 DRD1P21728 446 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 CES1P23141 567 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 PRKCHP24723 683 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 CXCR5P32302 372 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 ARL4AP40617 200 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 IL12RB1P42701 662 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 TNFRSF4P43489 277 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 PAPOLAP51003 745 aaKnown RBP6.02□□□□□ -1.45
SSX3-201ENST00000298396 ZNF135P52742 658 aaPredicted RBP6.02□□□□□ -1.45
SSX3-201ENST00000298396 RWDD2BP57060 319 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 GALNT2Q10471 571 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 GRSF1Q12849 480 aaKnown RBP eCLIP6.02□□□□□ -1.45
SSX3-201ENST00000298396 ZNF234Q14588 700 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 UBXN2BQ14CS0 331 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 POLD3Q15054 466 aaPredicted RBP6.02□□□□□ -1.45
SSX3-201ENST00000298396 PPP2R5EQ16537 467 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 IFI16Q16666 785 aaKnown RBP6.02□□□□□ -1.45
SSX3-201ENST00000298396 C2orf27AQ580R0 203 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 TFDP3Q5H9I0 405 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 ZNF569Q5MCW4 686 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 PEAR1Q5VY43 1037 aaPredicted RBP6.02□□□□□ -1.45
SSX3-201ENST00000298396 KIAA1211LQ6NV74 962 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 TMCO3Q6UWJ1 677 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 LINGO4Q6UY18 593 aa6.02□□□□□ -1.45
SSX3-201ENST00000298396 ZNF783Q6ZMS7 281 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms