RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 TXNRD3Q86VQ6 643 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 ZCCHC7Q8N3Z6 543 aaKnown RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 OR56A4Q8NGH8 313 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 RXFP2Q8WXD0 754 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 SUSD6Q92537 303 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 RXFP1Q9HBX9 757 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 HACD1B0YJ81 288 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 PLOD2O00469 737 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 MAP3K6O95382 1288 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 MNDAP41218 407 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 RASAL3Q86YV0 1011 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 CLEC10AQ8IUN9 316 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 SDR16C5Q8N3Y7 309 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 ZDHHC15Q96MV8 337 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 ACE2Q9BYF1 805 aaPredicted RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 DCLK3Q9C098 648 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 EHD4Q9H223 541 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 KCNF1Q9H3M0 494 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 CCNYL3P0C7X3 344 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 ERCC2P18074 760 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 MPPE1Q53F39 396 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 SLC25A25Q6KCM7 469 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 USP49Q70CQ1 688 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 TTC29Q8NA56 475 aaPredicted RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 COLGALT1Q8NBJ5 622 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 FAM98AQ8NCA5 519 aaKnown RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 GMCL1P1Q8NEA9 526 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 NMD3Q96D46 503 aaKnown RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 RNF31Q96EP0 1072 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 EPB41L4AQ9HCS5 686 aaPredicted RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 CLN6Q9NWW5 311 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 PNPLA6Q8IY17 1366 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 URADA6NGE7 173 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 TAS2R41P59536 307 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 CSHL1Q14406 222 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 ZNF268Q14587 947 aaPredicted RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 CARTPTQ16568 116 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 GLT6D1Q7Z4J2 308 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 ARMC10Q8N2F6 343 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 FBXO39Q8N4B4 442 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 CHST4Q8NCG5 386 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 ACTRT2Q8TDY3 377 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 CRISPLD1Q9H336 500 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 ADARB2Q9NS39 739 aaKnown RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 ZBTB14O43829 449 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 TKTL1P51854 596 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 OVGP1Q12889 678 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 OASLQ15646 514 aaKnown RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 POP5Q969H6 163 aaKnown RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 CDC42EP4Q9H3Q1 356 aaKnown RBP12.18□□□□□ -0.46
PCF11-201ENST00000298281 ASB7Q9H672 318 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 HAO1Q9UJM8 370 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 MAGI3Q5TCQ9 1506 aa12.18□□□□□ -0.46
PCF11-201ENST00000298281 BTBD19C9JJ37 291 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 F8VZ95 297 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 SLC28A1O00337 649 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 SERPINE1P05121 402 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 KLK7P49862 253 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 KCNA10Q16322 511 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 FAM91A1Q658Y4 838 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 UTS2BQ765I0 119 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 SATL1Q86VE3 508 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 FAM131BQ86XD5 332 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 TCEAL3Q969E4 200 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 TMBIM4Q9HC24 238 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 A1CFQ9NQ94 594 aaKnown RBP12.17□□□□□ -0.46
PCF11-201ENST00000298281 NDUFAF1Q9Y375 327 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 PCDHA3Q9Y5H8 950 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 C2orf71A6NGG8 1288 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 AKAP8O43823 692 aaKnown RBP12.17□□□□□ -0.46
PCF11-201ENST00000298281 XYLBO75191 536 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 ZCCHC18P0CG32 403 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 FSHRP23945 695 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 TBCELQ5QJ74 424 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 OVOS1Q6IE37 1185 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 TMPRSS6Q8IU80 811 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 CLHC1Q8NHS4 586 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 SMARCD1Q96GM5 515 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 SENP6Q9GZR1 1112 aaPredicted RBP12.17□□□□□ -0.46
PCF11-201ENST00000298281 STARD7Q9NQZ5 370 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 THAP1Q9NVV9 213 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 KBTBD4Q9NVX7 518 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 OGDHLQ9ULD0 1010 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 GRIP1Q9Y3R0 1128 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 GMEB1Q9Y692 573 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 KDM6BO15054 1643 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 IGSF6O95976 241 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 MSLNQ13421 630 aaPredicted RBP12.17□□□□□ -0.46
PCF11-201ENST00000298281 PAGE2BQ5JRK9 111 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 RIPOR1Q6ZS17 1223 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 ZNF720Q7Z2F6 126 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 SNX20Q7Z614 316 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 COX4I2Q96KJ9 171 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 CPNE1Q99829 537 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 RABGEF1Q9UJ41 708 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 MATN4O95460 622 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 NTSR2O95665 410 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 FAUP35544 74 aaKnown RBP12.17□□□□□ -0.46
PCF11-201ENST00000298281 CLCN3P51790 818 aa12.17□□□□□ -0.46
PCF11-201ENST00000298281 TBX4P57082 545 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms