RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 ATP1A4Q13733 1029 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 HERC6Q8IVU3 1022 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 ACMSDQ8TDX5 336 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 TUBGCP3Q96CW5 907 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 KLHL5Q96PQ7 755 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 PAIP1Q9H074 479 aaKnown RBP13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 ADNPQ9H2P0 1102 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 DNAJC28Q9NX36 388 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 MID2Q9UJV3 735 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 SORCS3Q9UPU3 1222 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 CROCCQ5TZA2 2017 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 AHSGP02765 367 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 CHRM3P20309 590 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 LRPAP1P30533 357 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 PPP1R8Q12972 351 aaKnown RBP13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 TBCELQ5QJ74 424 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 LIPMQ5VYY2 423 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 EPGNQ6UW88 154 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 TMEM110Q86TL2 294 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 RIOX2Q8IUF8 465 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 LILRA2Q8N149 483 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 WNT8BQ93098 351 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 DNAAF2Q9NVR5 837 aaKnown RBP13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 TRIP11Q15643 1979 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 PSMD12O00232 456 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 DLX3O60479 287 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 TADA2AO75478 443 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 ASLP04424 464 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 MYL3P08590 195 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 BDNFP23560 247 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 PCSK6P29122 969 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 TUBB3Q13509 450 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 C9orf57Q5W0N0 161 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 SLC26A9Q7LBE3 791 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 BLOC1S5Q8TDH9 187 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 VPS50Q96JG6 964 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 KLHL32Q96NJ5 620 aa13.47□□□□□ -0.25
TNFRSF21-201ENST00000296861 GAS2O43903 313 aaKnown RBP13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 NOL3O60936 208 aaKnown RBP13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 ADRA1BP35368 520 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 INHBCP55103 352 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 ADGRE1Q14246 886 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 RBM20Q5T481 1227 aaKnown RBP13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 ACBD5Q5T8D3 534 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 NAPEPLDQ6IQ20 393 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 KLC3Q6P597 504 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 CNSTQ6PJW8 725 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 SPPL2CQ8IUH8 684 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 NPWQ8N729 165 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 CXorf38Q8TB03 319 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 RMND5BQ96G75 393 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 ZBED3Q96IU2 234 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 NT5MQ9NPB1 228 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 NME7Q9Y5B8 376 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 HEATR9A2RTY3 570 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 MYBPHLA2RUH7 354 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 SCAMP3O14828 347 aaKnown RBP13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 SRP72O76094 671 aaKnown RBP13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 STT3AP46977 705 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 CCR3P51677 355 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 CDH17Q12864 832 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 SLC25A52Q3SY17 297 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 LDLRAP1Q5SW96 308 aa13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 PPHLN1Q8NEY8 458 aaKnown RBP13.46□□□□□ -0.25
TNFRSF21-201ENST00000296861 SMIM28A0A1B0GU29 152 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 AGRPO00253 132 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 ANGPT2O15123 496 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 C1QAP02745 245 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 PRKCGP05129 697 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 TFAP2AP05549 437 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 NCK1P16333 377 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 TPP2P29144 1249 aaPredicted RBP13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 PTPRCAPQ14761 206 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 TAZQ16635 292 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 VPS26BQ4G0F5 336 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 NOTUMQ6P988 496 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 C16orf87Q6PH81 154 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 HEXDCQ8WVB3 486 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 C1orf21Q9H246 121 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 DNAJB4Q9UDY4 337 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 PGAP2Q9UHJ9 254 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 FZD10Q9ULW2 581 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 TMCO1Q9UM00 188 aa13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 UBQLN1Q9UMX0 589 aaKnown RBP13.46□□□□□ -0.26
TNFRSF21-201ENST00000296861 MEIS3P2A8K0S8 358 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 USP2O75604 605 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 LRIG2O94898 1065 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 GPR107Q5VW38 600 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 MIB1Q86YT6 1006 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 CEP97Q8IW35 865 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 RP9Q8TA86 221 aaKnown RBP13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 CANT1Q8WVQ1 401 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 GAD1Q99259 594 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 PFDN4Q9NQP4 134 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 SIPA1L1O43166 1804 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 TTC36A6NLP5 189 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 G3V2L1 256 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 STRNO43815 780 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 B3GAT3O94766 335 aa13.45□□□□□ -0.26
TNFRSF21-201ENST00000296861 ENDOD1O94919 500 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms