RNA–Protein interactions for RNA: ENST00000292535.11

CUX1-201, Transcript of cut like homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CUX1, Length 13,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-201ENST00000292535 CELF6Q96J87 481 aaKnown RBP9.42□□□□□ -0.9
CUX1-201ENST00000292535 PNMA5Q96PV4 448 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 ABCC13Q9NSE7 274 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 TCP10LQ8TDR4 215 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 MRPS33Q9Y291 106 aaKnown RBP9.42□□□□□ -0.9
CUX1-201ENST00000292535 CLUHO75153 1309 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 CHN2P52757 468 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 ARFIP1P53367 373 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 MARK2Q7KZI7 788 aaKnown RBP9.42□□□□□ -0.9
CUX1-201ENST00000292535 SV2AQ7L0J3 742 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 EFCAB3Q8N7B9 438 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 ANKRD7Q92527 254 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 RIT1Q92963 219 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 COL26A1Q96A83 441 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 MARK1Q9P0L2 795 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 RPTORQ8N122 1335 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 APOC4-APOC2K7ER74 178 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 APOC2P02655 101 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 MAPK11Q15759 364 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 ZNF720Q7Z2F6 126 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 KBTBD8Q8NFY9 601 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 MPP4Q96JB8 637 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 RBMXL2O75526 392 aaKnown RBP9.42□□□□□ -0.9
CUX1-201ENST00000292535 ADH1CP00326 375 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 ZNF607Q96SK3 696 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 TSPAN16Q9UKR8 245 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 CATP04040 527 aaKnown RBP9.42□□□□□ -0.9
CUX1-201ENST00000292535 PALB2Q86YC2 1186 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 UROC1Q96N76 676 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 C3orf14Q9HBI5 128 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 CHADO15335 359 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 ADORA2AP29274 412 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 CASP4P49662 377 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 OLFML2AQ68BL7 652 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 NEK7Q8TDX7 302 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 AIF1LQ9BQI0 150 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 NEUROD4Q9HD90 331 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 MCUBQ9NWR8 336 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 SMPD4Q9NXE4 827 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 SORCS3Q9UPU3 1222 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 TBC1D30Q9Y2I9 924 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 SSNA1O43805 119 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 CBX2Q14781 532 aaPredicted RBP9.42□□□□□ -0.9
CUX1-201ENST00000292535 BROXQ5VW32 411 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 RAD9BQ6WBX8 426 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 ATCAYQ86WG3 371 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 GPRC5CQ9NQ84 441 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 SLC12A4Q9UP95 1085 aa9.42□□□□□ -0.9
CUX1-201ENST00000292535 CCDC166P0CW27 439 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 NFKB1P19838 968 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 CD86P42081 329 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 GSSP48637 474 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 DMPKQ09013 629 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 GRB14Q14449 540 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 FNIP1Q8TF40 1166 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 NOL6Q9H6R4 1146 aaKnown RBP9.41□□□□□ -0.9
CUX1-201ENST00000292535 NFASCO94856 1347 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 FAM205CA6NFA0 338 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 XKRYO14609 159 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 RIPK2O43353 540 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 TMCC2O75069 709 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 RPL19P84098 196 aaKnown RBP9.41□□□□□ -0.9
CUX1-201ENST00000292535 ORC1Q13415 861 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 OR6Y1Q8NGX8 325 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 NMD3Q96D46 503 aaKnown RBP9.41□□□□□ -0.9
CUX1-201ENST00000292535 KCNQ5Q9NR82 932 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 EHD3Q9NZN3 535 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 NR2E3Q9Y5X4 410 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 PROSCO94903 275 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 ABRQ12979 859 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 CBFBQ13951 182 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 ZC3H7AQ8IWR0 971 aaKnown RBP9.41□□□□□ -0.9
CUX1-201ENST00000292535 ABCC3O15438 1527 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 CCDC182A6NF36 153 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 LIN7AO14910 233 aaPredicted RBP9.41□□□□□ -0.9
CUX1-201ENST00000292535 TAS2R41P59536 307 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 GPAT3Q53EU6 434 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 PCID2Q5JVF3 399 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 GRIN3AQ8TCU5 1115 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 TIFAQ96CG3 184 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 AP2M1Q96CW1 435 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 CDADC1Q9BWV3 514 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 CCNB1IP1Q9NPC3 277 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 SLC35C2Q9NQQ7 365 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 TCF4P15884 667 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 IRF8Q02556 426 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 NIPA1Q7RTP0 329 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 BHLHE22Q8NFJ8 381 aaPredicted RBP9.41□□□□□ -0.9
CUX1-201ENST00000292535 RNF145Q96MT1 663 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 TSPAN18Q96SJ8 248 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 GPSM3Q9Y4H4 160 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 SNRPB2P08579 225 aaKnown RBP9.41□□□□□ -0.9
CUX1-201ENST00000292535 INSRRP14616 1297 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 WDR93Q6P2C0 686 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 RGL4Q8IZJ4 473 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 MNTQ99583 582 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 ALG9Q9H6U8 611 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 MCM8Q9UJA3 840 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 MGAT4AQ9UM21 535 aa9.41□□□□□ -0.9
CUX1-201ENST00000292535 AFDNP55196 1824 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms