RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 C11orf88Q6PI97 169 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 CACTIN-AS1Q8N1I8 211 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 ANKRD49Q8WVL7 239 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 TRNAU1APQ9NX07 287 aaKnown RBP15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 CST1P01037 141 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 NTRK1P04629 796 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 DNAJB2P25686 324 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 CCT3P49368 545 aaKnown RBP15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 TNK2Q07912 1038 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 PLCL1Q15111 1095 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 CHMP1BQ7LBR1 199 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 FAM47BQ8NA70 645 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 MYO5BQ9ULV0 1848 aa15.49■□□□□ 0.07
SHROOM4-201ENST00000289292 TMEM191CA6NGB0 347 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 B4GALT5O43286 388 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 CYP7B1O75881 506 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 CRATP43155 626 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 RHBDL3P58872 404 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 CARTPTQ16568 116 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 AP5B1Q2VPB7 878 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 WSCD1Q658N2 575 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 NUAK2Q9H093 628 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 MROH8Q9H579 483 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 REEP1Q9H902 201 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 HGFP14210 728 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 ADSSP30520 456 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 MSLNQ13421 630 aaPredicted RBP15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 CAMKK2Q96RR4 588 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 CLEC4MQ9H2X3 399 aaPredicted RBP15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 CLK4Q9HAZ1 481 aaKnown RBP15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 TBKBP1A7MCY6 615 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 RECQL4O94761 1208 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 CKMP06732 381 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 CERCAMQ5T4B2 595 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 ADHFE1Q8IWW8 467 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 OSGEPL1Q9H4B0 414 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 OPTCQ9UBM4 332 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 GMPPBQ9Y5P6 360 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 TCHHQ07283 1943 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 FGFR1P11362 822 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 ERCC2P18074 760 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 CCNA2P20248 432 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 GALNT3Q14435 633 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 ZNF284Q2VY69 593 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 LRRC38Q5VT99 294 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 SH3BP5LQ7L8J4 393 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 HIPK1Q86Z02 1210 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 KLHL23Q8NBE8 558 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 CIB1Q99828 191 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 ASB7Q9H672 318 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 KCNH4Q9UQ05 1017 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 WASF2Q9Y6W5 498 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 KLHL18O94889 574 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 CYP2A7P20853 494 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 GRK3P35626 688 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 TRMT11Q7Z4G4 463 aaKnown RBP15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 SPPL2CQ8IUH8 684 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 PQLC1Q8N2U9 271 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 LRRC57Q8N9N7 239 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 ST13P5Q8NFI4 369 aaPredicted RBP15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 PRDM12Q9H4Q4 367 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 ADAM28Q9UKQ2 775 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 PLLPQ9Y342 182 aa15.48■□□□□ 0.07
SHROOM4-201ENST00000289292 EPN2O95208 641 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 EZH1Q92800 747 aaPredicted RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 WNT8BQ93098 351 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 OSBPL11Q9BXB4 747 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 PDGFDQ9GZP0 370 aaPredicted RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 GALNT8Q9NY28 637 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 DHRS12A0PJE2 317 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 TYMPP19971 482 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 ATP5F1P24539 256 aaPredicted RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 POLD2P49005 469 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 SLC7A2P52569 658 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 CPNE8Q86YQ8 564 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 KIAA0319LQ8IZA0 1049 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 NDRG1Q92597 394 aaKnown RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 TEKT5Q96M29 485 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 RTKNQ9BST9 563 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 ADAMTS3O15072 1205 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 CD48P09326 243 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 CCNB1P14635 433 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 RPS12P25398 132 aaKnown RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 PTGIRP43119 386 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 SRP54P61011 504 aaKnown RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 RPL38P63173 70 aaKnown RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 SEMA5AQ13591 1074 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 CAPSQ13938 189 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 RALGPS1Q5JS13 557 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 FAM9CQ8IZT9 166 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 CYP4Z2PQ8N1L4 340 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 CDYL2Q8N8U2 506 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 UCMAQ8WVF2 138 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 TCF12Q99081 682 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 TRMT13Q9NUP7 481 aaKnown RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 OGDHLQ9ULD0 1010 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 HDAC3O15379 428 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 CYP1A1P04798 512 aaPredicted RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 BBS12Q6ZW61 710 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 GATAD2AQ86YP4 633 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms