RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 UBE3AQ05086 875 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 FAM153CQ494X1 144 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 ADAMTSL2Q86TH1 951 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 EIF1ADQ8N9N8 165 aaKnown RBP18.72■□□□□ 0.59
PCDH1-201ENST00000287008 CPXM1Q96SM3 734 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 SRRDQ9UH36 339 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 PLIN4Q96Q06 1357 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 CLUHO75153 1309 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 MRASO14807 208 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 CCL16O15467 120 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 EIF2S1P05198 315 aaKnown RBP18.72■□□□□ 0.59
PCDH1-201ENST00000287008 PABPC1P11940 636 aaKnown RBP18.72■□□□□ 0.59
PCDH1-201ENST00000287008 ATP6V1C1P21283 382 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 CORO1AP31146 461 aaKnown RBP18.72■□□□□ 0.59
PCDH1-201ENST00000287008 ALFQ53S48 1182 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 PRR23CQ6ZRP0 262 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 DEFB107AQ8IZN7 70 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 PRELID2Q8N945 189 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 KLHL5Q96PQ7 755 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 CERS4Q9HA82 394 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 GTF2A1LQ9UNN4 478 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 SLC27A6Q9Y2P4 619 aa18.72■□□□□ 0.59
PCDH1-201ENST00000287008 C15orf38-AP3S2A0A0A6YYH1 394 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 YBEYP58557 167 aaPredicted RBP18.71■□□□□ 0.59
PCDH1-201ENST00000287008 TLE2Q04725 743 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 ZNF844Q08AG5 666 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 PEX6Q13608 980 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 CAPRIN2Q6IMN6 1127 aaKnown RBP18.71■□□□□ 0.59
PCDH1-201ENST00000287008 ZNF621Q6ZSS3 439 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 ZCCHC23Q6ZST2 131 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 ARPINQ7Z6K5 226 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 TRMT13Q9NUP7 481 aaKnown RBP18.71■□□□□ 0.59
PCDH1-201ENST00000287008 SERPINI2O75830 405 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 TFEBP19484 476 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 IFI35P80217 286 aaPredicted RBP18.71■□□□□ 0.59
PCDH1-201ENST00000287008 SPIDRQ14159 915 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 C16orf46Q6P387 395 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 TRPC4APQ8TEL6 797 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 MORF4L1Q9UBU8 362 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 CCDC154A6NI56 674 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 MEI4A8MW99 385 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 MAGEC1O60732 1142 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 TAS2R40P59535 323 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 PRMT9Q6P2P2 845 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 PTGR2Q8N8N7 351 aaPredicted RBP18.71■□□□□ 0.59
PCDH1-201ENST00000287008 USP7Q93009 1102 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 P2RY11Q96G91 374 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 SNX6Q9UNH7 406 aa18.71■□□□□ 0.59
PCDH1-201ENST00000287008 SGTAO43765 313 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 CLK2P49760 499 aaKnown RBP18.7■□□□□ 0.58
PCDH1-201ENST00000287008 MBTD1Q05BQ5 628 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 PRKAG3Q9UGI9 489 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 ARL5CA6NH57 179 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 UNCXA6NJT0 531 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 FCHO1O14526 889 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 C4BPAP04003 597 aaKnown RBP18.7■□□□□ 0.58
PCDH1-201ENST00000287008 ATP5F1P24539 256 aaPredicted RBP18.7■□□□□ 0.58
PCDH1-201ENST00000287008 FAM98BQ52LJ0 330 aaKnown RBP18.7■□□□□ 0.58
PCDH1-201ENST00000287008 FAM124AQ86V42 546 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 SIKE1Q9BRV8 207 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 SLC25A23Q9BV35 468 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 CCDC167Q9P0B6 97 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 RAB21Q9UL25 225 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 TPP1O14773 563 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 FSCN2O14926 492 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 MDM4O15151 490 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 CNPP09543 421 aaKnown RBP18.7■□□□□ 0.58
PCDH1-201ENST00000287008 NTSP30990 170 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 FLT3P36888 993 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 VARS2Q5ST30 1063 aaKnown RBP18.7■□□□□ 0.58
PCDH1-201ENST00000287008 ZNF544Q6NX49 715 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 ZNF786Q8N393 782 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 OR6K2Q8NGY2 324 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 HDAC10Q969S8 669 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 MRPL48Q96GC5 212 aaKnown RBP18.7■□□□□ 0.58
PCDH1-201ENST00000287008 EBNA1BP2Q99848 306 aaKnown RBP18.7■□□□□ 0.58
PCDH1-201ENST00000287008 RAD21L1Q9H4I0 556 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 GDF3Q9NR23 364 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 KCNE2Q9Y6J6 123 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 CASZ1Q86V15 1759 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 ISM1B1AKI9 464 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 TBL3Q12788 808 aaKnown RBP18.7■□□□□ 0.58
PCDH1-201ENST00000287008 TRIM60Q495X7 471 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 TMEM132CQ8N3T6 1108 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 DQX1Q8TE96 717 aaKnown RBP18.7■□□□□ 0.58
PCDH1-201ENST00000287008 FIG4Q92562 907 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 C11orf84Q9BUA3 381 aaPredicted RBP18.7■□□□□ 0.58
PCDH1-201ENST00000287008 SYBUQ9NX95 663 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 ZNF229Q9UJW7 825 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 ASF1AQ9Y294 204 aa18.7■□□□□ 0.58
PCDH1-201ENST00000287008 AGRPO00253 132 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 COL9A3Q14050 684 aaPredicted RBP18.69■□□□□ 0.58
PCDH1-201ENST00000287008 RBFAQ8N0V3 343 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 CYP4X1Q8N118 509 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 BEND7Q8N7W2 519 aaPredicted RBP18.69■□□□□ 0.58
PCDH1-201ENST00000287008 TIFAQ96CG3 184 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 FAM124BQ9H5Z6 455 aaPredicted RBP18.69■□□□□ 0.58
PCDH1-201ENST00000287008 MAPRE3Q9UPY8 281 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 SLC26A9Q7LBE3 791 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 IRGQQ8WZA9 623 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms