RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 HEMK1Q9Y5R4 338 aaPredicted RBP2.83□□□□□ -1.96
CHD1-201ENST00000284049 NSD2O96028 1365 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 COL16A1Q07092 1604 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 TMEM110-MUSTN1A8MSY1 372 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 PLOD2O00469 737 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 UBE2CO00762 179 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 PROCP04070 461 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 DLDP09622 509 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 NR2F1P10589 423 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 CCNCP24863 283 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 CHRNA3P32297 505 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 CLCN2P51788 898 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 SLC9A4Q6AI14 798 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 TAPT1Q6NXT6 567 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 RPUSD3Q6P087 351 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 DCLRE1AQ6PJP8 1040 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 SLC2A7Q6PXP3 512 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 CLNKQ7Z7G1 428 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 CFHR4Q92496 578 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 OTULINQ96BN8 352 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 EDC3Q96F86 508 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 ZNF668Q96K58 619 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 LIN28AQ9H9Z2 209 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 GPN1Q9HCN4 374 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 KLHL8Q9P2G9 620 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 ACSL6Q9UKU0 697 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 KDRP35968 1356 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 PNPLA6Q8IY17 1366 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 RGSL1A5PLK6 1076 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 PCDH17O14917 1159 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 IPO13O94829 963 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 TOX4O94842 621 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 IFNAR1P17181 557 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 MYF6P23409 242 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 EPHA8P29322 1005 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 CD6P30203 668 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 CASRP41180 1078 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 NDUFV1P49821 464 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 CDK18Q07002 472 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 PLA2G7Q13093 441 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 THOC5Q13769 683 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 BYSLQ13895 437 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 IMMTQ16891 758 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 ILDR2Q71H61 639 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 RHOT2Q8IXI1 618 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 EID2BQ96D98 161 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 MSI2Q96DH6 328 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.82□□□□□ -1.96
CHD1-201ENST00000284049 TEX13AQ9BXU3 409 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 CDIP1Q9H305 208 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 C12orf65Q9H3J6 166 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 IL21RQ9HBE5 538 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 SYTL2Q9HCH5 934 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FARSBQ9NSD9 589 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 PCSK1NQ9UHG2 260 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 TMPRSS11EQ9UL52 423 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 PCDHGA5Q9Y5G8 931 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 IGSF1Q8N6C5 1336 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 YTHDC2Q9H6S0 1430 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 A0A1W2PR48 441 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FAM90A18PA6NE21 464 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FAM90A16PA6NEW6 464 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FAM90A9PA6NNJ1 464 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FAM90A5PA8MXJ8 464 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 CD3EAPO15446 510 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 TEX28O15482 410 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 DNAJB5O75953 348 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 TRUB2O95900 331 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 AK1P00568 194 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 A1BGP04217 495 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FAM90A15PP0C7V4 464 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FAM90A14PP0C7W9 464 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 ATP5OP48047 213 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 GSK3AP49840 483 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 EPHB4P54760 987 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 VCPP55072 806 aaKnown RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 ITGA1P56199 1179 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 ARHGAP8P85298 464 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 MORF4L2Q15014 288 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 C19orf54Q5BKX5 351 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 TRIM72Q6ZMU5 477 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 KANSL1Q7Z3B3 1105 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 CAMKMTQ7Z624 323 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 ANKS1BQ7Z6G8 1248 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 MICU3Q86XE3 530 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 FAM90A1Q86YD7 464 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 SCML4Q8N228 414 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 AMER2Q8N7J2 671 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 CCNYQ8ND76 341 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 WFDC12Q8WWY7 111 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 SNX19Q92543 992 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 GLG1Q92896 1179 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 LPPQ93052 612 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 MYRFLQ96LU7 910 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 NAP1L3Q99457 506 aaPredicted RBP2.82□□□□□ -1.96
CHD1-201ENST00000284049 PAFAH2Q99487 392 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 HEMGNQ9BXL5 484 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 GPR62Q9BZJ7 368 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 RNF32Q9H0A6 362 aa2.82□□□□□ -1.96
CHD1-201ENST00000284049 HRH4Q9H3N8 390 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms