RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 SCNN1BP51168 640 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 RENBPP51606 427 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 ARSEP51690 589 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 NEK3P51956 506 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 ATXN3P54252 364 aaPredicted RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 ADPRHP54922 357 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 RWDD2BP57060 319 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 CCZ1BP86790 482 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 CCZ1P86791 482 aaPredicted RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 GBE1Q04446 702 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 SLC10A7Q0GE19 358 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 AP1B1Q10567 949 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 TFDP2Q14188 446 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 GSE1Q14687 1217 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 RFTN1Q14699 578 aaPredicted RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 PAFAH1B3Q15102 231 aaKnown RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 SF3A2Q15428 464 aaKnown RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 CYTH1Q15438 398 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 MYLK3Q32MK0 819 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 INO80DQ53TQ3 878 aaPredicted RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 LRRC73Q5JTD7 316 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 MARC1Q5VT66 337 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 ZNF318Q5VUA4 2279 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 AFMIDQ63HM1 303 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 TCEAL6Q6IPX3 200 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 TIGD7Q6NT04 549 aaPredicted RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 MFSD7Q6UXD7 560 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 NPNTQ6UXI9 565 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 GDPD4Q6W3E5 623 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 SPOCD1Q6ZMY3 1216 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 ADAT2Q7Z6V5 191 aaKnown RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 SLC41A1Q8IVJ1 513 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 KATNAL2Q8IYT4 538 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 RCOR2Q8IZ40 523 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 ZCCHC9Q8N567 271 aaKnown RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 UBL4BQ8N7F7 174 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 TSEN2Q8NCE0 465 aaKnown RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 TMIEQ8NEW7 156 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 OR2T34Q8NGX1 318 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 FAM71BQ8TC56 605 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 KRT35Q92764 455 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 TCEAL3Q969E4 200 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 ISG20Q96AZ6 181 aaKnown RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 ARRDC3Q96B67 414 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 LOXL4Q96JB6 756 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 KLHL32Q96NJ5 620 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 RNF157Q96PX1 679 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 MYOCQ99972 504 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 HEMGNQ9BXL5 484 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 PDFQ9HBH1 243 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 NT5MQ9NPB1 228 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 SCUBE2Q9NQ36 999 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 AASDHPPTQ9NRN7 309 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 VPS45Q9NRW7 570 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 SEMA4GQ9NTN9 838 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 WSB2Q9NYS7 404 aaPredicted RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 LHX3Q9UBR4 397 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 SEPT3Q9UH03 358 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 EIF2B4Q9UI10 523 aaKnown RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 PPM1HQ9ULR3 514 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 PACSIN2Q9UNF0 486 aaPredicted RBP6.63□□□□□ -1.35
CD44-204ENST00000279452 ADGRG1Q9Y653 693 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 CAPN6Q9Y6Q1 641 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 WASF2Q9Y6W5 498 aa6.63□□□□□ -1.35
CD44-204ENST00000279452 NCOR1O75376 2440 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 ZDBF2Q9HCK1 2354 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 CXorf51AA0A1B0GTR3 108 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 TTC24A2A3L6 582 aaPredicted RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 BCLAF3A2AJT9 711 aaKnown RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 C16orf96A6NNT2 1141 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 PATE3B3GLJ2 98 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 PPP1R12AO14974 1030 aaPredicted RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 KHNYNO15037 678 aaKnown RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 INSIG1O15503 277 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 SLC7A4O43246 635 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 MAFKO60675 156 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 CST8O60676 142 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 RNGTTO60942 597 aaKnown RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 ZNF821O75541 412 aaPredicted RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 GJB3O75712 270 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 CD160O95971 181 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 IGLV3-19P01714 112 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 ADRB3P13945 408 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 ITGB7P26010 798 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 DRD3P35462 400 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 DPP6P42658 865 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 CDKN2BP42772 138 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 MAPK8P45983 427 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 RGRP47804 291 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 MAXP61244 160 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 PPP2CBP62714 309 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 PPP2CAP67775 309 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 BCL2L1Q07817 233 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 GALNT2Q10471 571 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 ZNF211Q13398 564 aaPredicted RBP6.62□□□□□ -1.35
CD44-204ENST00000279452 ZNF805Q5CZA5 627 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 TRIM61Q5EBN2 209 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 TFDP3Q5H9I0 405 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 SPDYCQ5MJ68 293 aa6.62□□□□□ -1.35
CD44-204ENST00000279452 AGBL4Q5VU57 503 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms