RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 MTX3Q5HYI7 312 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 TEDDM1Q5T9Z0 273 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 DPP9Q86TI2 863 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 SNX32Q86XE0 403 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 ADGRF2Q8IZF7 708 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 CLIP4Q8N3C7 705 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 SHCBP1Q8NEM2 672 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 CLEC4CQ8WTT0 213 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 PDCD6IPQ8WUM4 868 aaKnown RBP7.72□□□□□ -1.17
TRIM6-201ENST00000278302 SLC35F5Q8WV83 523 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 C18orf25Q96B23 403 aaPredicted RBP7.72□□□□□ -1.17
TRIM6-201ENST00000278302 MOCOSQ96EN8 888 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 C16orf70Q9BSU1 422 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 TRPV6Q9H1D0 765 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 PNPLA8Q9NP80 782 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 SMYD2Q9NRG4 433 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 PNPLA3Q9NST1 481 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 SETD4Q9NVD3 440 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.72□□□□□ -1.17
TRIM6-201ENST00000278302 GNPTGQ9UJJ9 305 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 PRELID1Q9Y255 219 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 SLC27A5Q9Y2P5 690 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 TTLL3Q9Y4R7 772 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 COL1A2P08123 1366 aa7.72□□□□□ -1.17
TRIM6-201ENST00000278302 LRRC37A2A6NM11 1700 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 PRSS51A0A1B0GVH4 220 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 TMEM114B3SHH9 223 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 NEMP1O14524 444 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 MDM4O15151 490 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 APOEP02649 317 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 MX2P20592 715 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 ENDOUP21128 410 aaKnown RBP7.71□□□□□ -1.17
TRIM6-201ENST00000278302 TXNL4AP83876 142 aaKnown RBP7.71□□□□□ -1.17
TRIM6-201ENST00000278302 RAB39AQ14964 217 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 MOGQ16653 247 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 HEATR6Q6AI08 1181 aaKnown RBP7.71□□□□□ -1.17
TRIM6-201ENST00000278302 CASC4Q6P4E1 433 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 C4orf22Q6V702 233 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 BNC2Q6ZN30 1099 aaPredicted RBP7.71□□□□□ -1.17
TRIM6-201ENST00000278302 DSG4Q86SJ6 1040 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 CAND1Q86VP6 1230 aaKnown RBP7.71□□□□□ -1.17
TRIM6-201ENST00000278302 DSELQ8IZU8 1212 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 PPP1R13LQ8WUF5 828 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 PTCD2Q8WV60 388 aaKnown RBP7.71□□□□□ -1.17
TRIM6-201ENST00000278302 KHSRPQ92945 711 aaKnown RBP eCLIP7.71□□□□□ -1.17
TRIM6-201ENST00000278302 SLC10A4Q96EP9 437 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 CCDC138Q96M89 665 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 CTRCQ99895 268 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 ZNF670Q9BS34 389 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 OSBPL11Q9BXB4 747 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 MAGEB5Q9BZ81 275 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 SNX25Q9H3E2 840 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 DPEP3Q9H4B8 488 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 FAM124BQ9H5Z6 455 aaPredicted RBP7.71□□□□□ -1.17
TRIM6-201ENST00000278302 POLR1BQ9H9Y6 1135 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 SCHIP1Q9P0W5 487 aaPredicted RBP7.71□□□□□ -1.17
TRIM6-201ENST00000278302 AP4E1Q9UPM8 1137 aa7.71□□□□□ -1.17
TRIM6-201ENST00000278302 PAPPA2Q9BXP8 1791 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 HCRTO43612 131 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 GMNNO75496 209 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 METTL18O95568 372 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 ESRRBO95718 433 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 CSH1P0DML2 217 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 CSH2P0DML3 217 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 GNL1P36915 607 aaPredicted RBP7.71□□□□□ -1.18
TRIM6-201ENST00000278302 NR4A2P43354 598 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 YAP1P46937 504 aaKnown RBP7.71□□□□□ -1.18
TRIM6-201ENST00000278302 GBE1Q04446 702 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 LRP8Q14114 963 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 ZNF792Q3KQV3 632 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 ZNF618Q5T7W0 954 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 SLC27A1Q6PCB7 646 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 TTC33Q6PID6 262 aaPredicted RBP7.71□□□□□ -1.18
TRIM6-201ENST00000278302 ZDHHC17Q8IUH5 632 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 PEX5LQ8IYB4 626 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 PDZD8Q8NEN9 1154 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 OR6J1Q8NGC5 347 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 DEPDC1BQ8WUY9 529 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 ACDQ96AP0 544 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 SGF29Q96ES7 293 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 TMA16Q96EY4 203 aaKnown RBP7.71□□□□□ -1.18
TRIM6-201ENST00000278302 PCDHAC1Q9H158 963 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 PLEKHA5Q9HAU0 1116 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 POPDC2Q9HBU9 364 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 SLC17A6Q9P2U8 582 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 KLHL3Q9UH77 587 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 CDH7Q9ULB5 785 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 CPQQ9Y646 472 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 SYNJ2BP-COX16A0A087WUM0 186 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 CCDC162PA2VCL2 907 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 SLC15A5A6NIM6 579 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 BMP10O95393 424 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 KRT75O95678 551 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 ENO2P09104 434 aaPredicted RBP7.71□□□□□ -1.18
TRIM6-201ENST00000278302 FGF3P11487 239 aaPredicted RBP7.71□□□□□ -1.18
TRIM6-201ENST00000278302 MAP4P27816 1152 aaKnown RBP7.71□□□□□ -1.18
TRIM6-201ENST00000278302 IDUAP35475 653 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 ARL4AP40617 200 aa7.71□□□□□ -1.18
TRIM6-201ENST00000278302 BST2Q10589 180 aaKnown RBP7.71□□□□□ -1.18
TRIM6-201ENST00000278302 SELENBP1Q13228 472 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms