RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TRIM55Q9BYV6 548 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 PRKD2Q9BZL6 878 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 PDFQ9HBH1 243 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 NPHS2Q9NP85 383 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 MRPL17Q9NRX2 175 aaKnown RBP9.71□□□□□ -0.86
TRIM55-201ENST00000276573 TREX1Q9NSU2 369 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 TMEM216Q9P0N5 145 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 UXTQ9UBK9 157 aaPredicted RBP9.71□□□□□ -0.86
TRIM55-201ENST00000276573 SLC2A6Q9UGQ3 507 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 AGO1Q9UL18 857 aaKnown RBP9.71□□□□□ -0.86
TRIM55-201ENST00000276573 CHKBQ9Y259 395 aa9.71□□□□□ -0.86
TRIM55-201ENST00000276573 A0A0D9SEW6 157 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 HEATR9A2RTY3 570 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 TEX28O15482 410 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 SIN3BO75182 1162 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 CLDN11O75508 207 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 F11P03951 625 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 PROCP04070 461 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 F7P08709 466 aaPredicted RBP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 PAMP19021 973 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 ARNTP27540 789 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 HOXD9P28356 352 aaPredicted RBP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 GABRB3P28472 473 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 ABCG1P45844 678 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 RPS24P62847 133 aaKnown RBP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 IRX4P78413 519 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 TMPRSS15P98073 1019 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 STX3Q13277 289 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 GRM3Q14832 879 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 FASTKD1Q53R41 847 aaKnown RBP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 CES4AQ5XG92 561 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 KIAA0930Q6ICG6 404 aaPredicted RBP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 CMC1Q7Z7K0 106 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 TMEM150AQ86TG1 271 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 ZC3HC1Q86WB0 502 aaKnown RBP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 ACVR1CQ8NER5 493 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 OR7D4Q8NG98 312 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 OR52K2Q8NGK3 314 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 ATXN7L3BQ96GX2 97 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 VPS39Q96JC1 886 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 GPR22Q99680 433 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 SEMA3CQ99985 751 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 RASSF4Q9H2L5 321 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 RHOJQ9H4E5 214 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 CAB39LQ9H9S4 337 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 KCNK13Q9HB14 408 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 A0A096LPK6 155 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 ILVBLA1L0T0 632 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 MUSKO15146 869 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 KDELR3O43731 214 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 TSPAN3O60637 253 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 DCTN3O75935 186 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 BAIAP3O94812 1187 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 C2P06681 752 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 IRF1P10914 325 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 GMPRP36959 345 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 POLD2P49005 469 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 CSRP3P50461 194 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 SGSHP51688 502 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 ZNF177Q13360 481 aaPredicted RBP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 CTBP1Q13363 440 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 SEPT6Q14141 434 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 SETDB1Q15047 1291 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 CCDC153Q494R4 210 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 SIRPB2Q5JXA9 342 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 TSTD2Q5T7W7 516 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 IL31Q6EBC2 164 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 CHST9Q7L1S5 443 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 NLRP9Q7RTR0 991 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 PLD6Q8N2A8 252 aaKnown RBP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 PRICKLE1Q96MT3 831 aaPredicted RBP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 C7orf26Q96N11 449 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 LRRC37BQ96QE4 947 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 CYP2S1Q96SQ9 504 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 YME1L1Q96TA2 773 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 DDX50Q9BQ39 737 aaKnown RBP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 SPON2Q9BUD6 331 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 POLR1EQ9GZS1 481 aaKnown RBP9.7□□□□□ -0.86
TRIM55-201ENST00000276573 ZNF358Q9NW07 568 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 DCTN4Q9UJW0 460 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 PCDHB12Q9Y5F1 795 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 INSL5Q9Y5Q6 135 aa9.7□□□□□ -0.86
TRIM55-201ENST00000276573 BRCA2P51587 3418 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 H0YHG0 523 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 HGSO14964 777 aaPredicted RBP9.69□□□□□ -0.86
TRIM55-201ENST00000276573 SNNO75324 88 aaPredicted RBP9.69□□□□□ -0.86
TRIM55-201ENST00000276573 PAPSS2O95340 614 aaPredicted RBP9.69□□□□□ -0.86
TRIM55-201ENST00000276573 EPOP01588 193 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 DLDP09622 509 aaKnown RBP9.69□□□□□ -0.86
TRIM55-201ENST00000276573 SPATA31D3P0C874 917 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 MBL2P11226 248 aaPredicted RBP9.69□□□□□ -0.86
TRIM55-201ENST00000276573 PPM1AP35813 382 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 ARFIP2P53365 341 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 OXCT1P55809 520 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 OCRLQ01968 901 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 THOC5Q13769 683 aaKnown RBP9.69□□□□□ -0.86
TRIM55-201ENST00000276573 ZNF235Q14590 738 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 DLG2Q15700 870 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms