RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 IRAK3Q9Y616 596 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 PACS2Q86VP3 889 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.06□□□□□ -1.12
LIMD1-201ENST00000273317 GORASP1Q9BQQ3 440 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 CEMIPQ8WUJ3 1361 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 JCADQ9P266 1359 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 SIGLEC16A6NMB1 481 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 QSOX1O00391 747 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 SERPINA4P29622 427 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 RPL9P32969 192 aaKnown RBP8.06□□□□□ -1.12
LIMD1-201ENST00000273317 RPA3P35244 121 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-201ENST00000273317 BACE1P56817 501 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 HSF2Q03933 536 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 ARMC12Q5T9G4 340 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 TRPV1Q8NER1 839 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 ATXN10Q9UBB4 475 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 AXIN2Q9Y2T1 843 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 AK5Q9Y6K8 562 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 MYH14Q7Z406 1995 aaKnown RBP8.06□□□□□ -1.12
LIMD1-201ENST00000273317 RGSL1A5PLK6 1076 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 SLC28A1O00337 649 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 MAP2K7O14733 419 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 TNFRSF21O75509 655 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 FARP2O94887 1054 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-201ENST00000273317 OR6A2O95222 327 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 NUDT17P0C025 328 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 RARAP10276 462 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 ATP5F1P24539 256 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-201ENST00000273317 PIWIL4Q7Z3Z4 852 aaKnown RBP8.06□□□□□ -1.12
LIMD1-201ENST00000273317 ARMC8Q8IUR7 673 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 OFCC1Q8IZS5 231 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 ZHX1-C8orf76Q96EF9 292 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 ZNF607Q96SK3 696 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 APOL2Q9BQE5 337 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 GPATCH2LQ9NWQ4 482 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 UGT2B11O75310 529 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 CLK3P49761 638 aaKnown RBP8.06□□□□□ -1.12
LIMD1-201ENST00000273317 CPB2Q96IY4 423 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 ARL15Q9NXU5 204 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 MYH7BA7E2Y1 1941 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 SALL1Q9NSC2 1324 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 PGM3O95394 542 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 LDOC1O95751 146 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-201ENST00000273317 SMCO1Q147U7 214 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 C5orf22Q49AR2 442 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 ANXA8L1Q5VT79 327 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 LIPMQ5VYY2 423 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 NEPROQ6NW34 567 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 CREG2Q8IUH2 290 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 ARRDC4Q8NCT1 418 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 NFASCO94856 1347 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 CEP170BQ9Y4F5 1589 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-201ENST00000273317 SERPINB7O75635 380 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 UPP2O95045 317 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 RHAGQ02094 409 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 POLNQ7Z5Q5 900 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 ZKSCAN4Q969J2 545 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-201ENST00000273317 PLEKHG4BQ96PX9 1271 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 POLR1EQ9GZS1 481 aaKnown RBP8.06□□□□□ -1.12
LIMD1-201ENST00000273317 ETNK2Q9NVF9 386 aa8.06□□□□□ -1.12
LIMD1-201ENST00000273317 PIGNO95427 931 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 PRG2P13727 222 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CCR3P51677 355 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 VBP1P61758 197 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 IFI35P80217 286 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ORC1Q13415 861 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 LSM12Q3MHD2 195 aaKnown RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ADAMTSL2Q86TH1 951 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ETNPPLQ8TBG4 499 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 PHF10Q8WUB8 498 aaKnown RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 SLC47A1Q96FL8 570 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 FUCA2Q9BTY2 467 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 DGCR6LQ9BY27 220 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CKLFQ9UBR5 152 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CAP2P40123 477 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 PSEN1P49768 467 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 DRG2P55039 364 aaKnown RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 PFKFB4Q16877 469 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 SETMARQ53H47 684 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 POP1Q99575 1024 aaKnown RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 DSN1Q9H410 356 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CCDC59Q9P031 241 aaKnown RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ARMCX1Q9P291 453 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 C2CD2LO14523 706 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 VAPBO95292 243 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ADRA1DP25100 572 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 STARP49675 285 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ATP6V0D1P61421 351 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ART4Q93070 314 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 COX4I2Q96KJ9 171 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ATP13A1Q9HD20 1204 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 LGR5O75473 907 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 BOP1Q14137 746 aaKnown RBP8.05□□□□□ -1.12
LIMD1-201ENST00000273317 PSMD5Q16401 504 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 FAM81AQ8TBF8 368 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 MBOAT7Q96N66 472 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CHKBQ9Y259 395 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 ROBO3Q96MS0 1386 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 LCA5LO95447 670 aa8.05□□□□□ -1.12
LIMD1-201ENST00000273317 CXCL8P10145 99 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms