RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 SLC24A2Q9UI40 661 aa13.4□□□□□ -0.27
PRDM16-201ENST00000270722 MCIDASD6RGH6 385 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 ATG7O95352 703 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 PRLRP16471 622 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 LONRF1Q17RB8 773 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 KDM7AQ6ZMT4 941 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 JAMLQ86YT9 394 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 FAM126AQ9BYI3 521 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-201ENST00000270722 PRDM4Q9UKN5 801 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 CLUHO75153 1309 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 CYB5AP00167 134 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 NKX1-1Q15270 411 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-201ENST00000270722 ZDHHC20Q5W0Z9 365 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 SPPL2AQ8TCT8 520 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 ITCHQ96J02 903 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 TRIM2Q9C040 744 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 ZCWPW1Q9H0M4 648 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 UBDO15205 165 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 YTHDF3Q7Z739 585 aaKnown RBP13.39□□□□□ -0.27
PRDM16-201ENST00000270722 ZNF558Q96NG5 402 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 RNF208Q9H0X6 261 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 ATP13A3Q9H7F0 1226 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 MSH4O15457 936 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 PTPN1P18031 435 aaKnown RBP13.39□□□□□ -0.27
PRDM16-201ENST00000270722 TXNRD3Q86VQ6 643 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 TMC8Q8IU68 726 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 ARID3BQ8IVW6 561 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-201ENST00000270722 KBTBD8Q8NFY9 601 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 SPATA9Q9BWV2 254 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 XPNPEP3Q9NQH7 507 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 OPTCQ9UBM4 332 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 PSMD11O00231 422 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 CPSF4O95639 269 aaKnown RBP13.39□□□□□ -0.27
PRDM16-201ENST00000270722 MAPTP10636 758 aaKnown RBP13.39□□□□□ -0.27
PRDM16-201ENST00000270722 BMP7P18075 431 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 CDK16Q00536 496 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 ADGRG2Q8IZP9 1017 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 DSN1Q9H410 356 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 MED11Q9P086 117 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 GNPTGQ9UJJ9 305 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 TMEM120BA0PK00 339 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 AKAP8O43823 692 aaKnown RBP13.39□□□□□ -0.27
PRDM16-201ENST00000270722 CHN1P15882 459 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 LRRC14Q15048 493 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 NT5DC3Q86UY8 548 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 TRAPPC5Q8IUR0 188 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 UTP15Q8TED0 518 aaKnown RBP13.39□□□□□ -0.27
PRDM16-201ENST00000270722 SDK1Q7Z5N4 2213 aa13.39□□□□□ -0.27
PRDM16-201ENST00000270722 STX16-NPEPL1H3BU86 382 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 STX16O14662 325 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 CHRNA5P30532 468 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 ATP5C1P36542 298 aaKnown RBP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 FAM171A1Q5VUB5 890 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 SCARA3Q6AZY7 606 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 ADHFE1Q8IWW8 467 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 SYT15Q9BQS2 421 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 POLR1EQ9GZS1 481 aaKnown RBP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 ENTPD5O75356 428 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 TSPAN19P0C672 248 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 PDPK2PQ6A1A2 396 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 TCF25Q9BQ70 676 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 SETD4Q9NVD3 440 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 RAPGEFL1Q9UHV5 662 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 MRPS23Q9Y3D9 190 aaKnown RBP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 NET1Q7Z628 596 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 SLC26A11Q86WA9 606 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 FAM126BQ8IXS8 530 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 NACC2Q96BF6 587 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 ALG6Q9Y672 507 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 A0A1W2PQ67 120 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 HAT1O14929 419 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 GYS1P13807 737 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 COMTP21964 271 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 SMIM5Q71RC9 77 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 CSF1RP07333 972 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 RAB5BP61020 215 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 PHC1P78364 1004 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 PTSQ03393 145 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 AIFM3Q96NN9 605 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 RBM22Q9NW64 420 aaKnown RBP eCLIP13.38□□□□□ -0.275e-6■■■■□ 20.7
PRDM16-201ENST00000270722 PCYT1BQ9Y5K3 369 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 LBPP18428 481 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 CSNK2BP67870 215 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 BOP1Q14137 746 aaKnown RBP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 LSM12Q3MHD2 195 aaKnown RBP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 GARNL3Q5VVW2 1013 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 SLC27A1Q6PCB7 646 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 AVL9Q8NBF6 648 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 METTL21AQ8WXB1 218 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 EHD4Q9H223 541 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 A1CFQ9NQ94 594 aaKnown RBP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 TTLL8A6PVC2 850 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 GTPBP1O00178 669 aaKnown RBP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 SERPINB7O75635 380 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 DHFRP00374 187 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 PPIBP23284 216 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms