RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 PDK4Q16654 411 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 CYP2A13Q16696 494 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 NKAPQ8N5F7 415 aaKnown RBP17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 BTNL10A8MVZ5 291 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 SLITRK3O94933 977 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 CCDC166P0CW27 439 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 ACSM2AQ08AH3 577 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 PCID2Q5JVF3 399 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 TMEM63BQ5T3F8 832 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 ACSM2BQ68CK6 577 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 CCDC59Q9P031 241 aaKnown RBP17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 LACTBL1A8MY62 500 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 FAM171A1Q5VUB5 890 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 BRSK2Q8IWQ3 736 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 LYVE1Q9Y5Y7 322 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 ADSSP30520 456 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 DRG2P55039 364 aaKnown RBP17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 BNC1Q01954 994 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 CCDC157Q569K6 752 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 CES3Q6UWW8 571 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 RDH11Q8TC12 318 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 KAT5Q92993 513 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 PPP1R16AQ96I34 528 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 PIH1D1Q9NWS0 290 aaKnown RBP17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 POLLQ9UGP5 575 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 CRATP43155 626 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 TUFMP49411 452 aaKnown RBP17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 BNIP2Q12982 314 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 DDI2Q5TDH0 399 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 SELENOMQ8WWX9 145 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 MRPL9Q9BYD2 267 aaKnown RBP17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 LEF1Q9UJU2 399 aaPredicted RBP17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 SALL1Q9NSC2 1324 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 ANKDD1BA6NHY2 528 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 DDX3XO00571 662 aaKnown RBP eCLIP17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 IDO1P14902 403 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 IDH2P48735 452 aaKnown RBP17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 TBCDQ9BTW9 1192 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 C2orf49Q9BVC5 232 aaPredicted RBP17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 PHF11Q9UIL8 331 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 IKZF3Q9UKT9 509 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 CHKBQ9Y259 395 aa17.64■□□□□ 0.41
NOTCH3-201ENST00000263388 UBE2Q2LH0YL09 131 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 MAMLD1Q13495 774 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 CCDC80Q76M96 950 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 ADAM32Q8TC27 787 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 SDK1Q7Z5N4 2213 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 TNFRSF21O75509 655 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 OR6A2O95222 327 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 HLA-DQA2P01906 255 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 KBTBD8Q8NFY9 601 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 HDAC7Q8WUI4 952 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 POLR2EP19388 210 aaKnown RBP17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 PKNOX1P55347 436 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 CBWD6Q4V339 395 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 SKA1Q96BD8 255 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 ARF5P84085 180 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 SMCO1Q147U7 214 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 TCEA2Q15560 299 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 CHPFQ8IZ52 775 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 GAKO14976 1311 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 FAM92AA1XBS5 289 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 ADRA1DP25100 572 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 TLX1P31314 330 aaPredicted RBP17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 GRIA4P48058 902 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 CCNIQ14094 377 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 LY6KQ17RY6 165 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 NEPROQ6NW34 567 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 ALLCQ8N6M5 410 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 PSMB4P28070 264 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 NR1H2P55055 460 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 PRMT6Q96LA8 375 aaPredicted RBP17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 EPB41L1Q9H4G0 881 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 STARD7Q9NQZ5 370 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 SAE1Q9UBE0 346 aaPredicted RBP17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 SPATA31D1Q6ZQQ2 1576 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 E5RJQ4 531 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 TCF4P15884 667 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 ZNF37AP17032 561 aaPredicted RBP17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 LPIN1Q14693 890 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 TTC7BQ86TV6 843 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 METTL3Q86U44 580 aaKnown RBP17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 CHID1Q9BWS9 393 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 WDR12Q9GZL7 423 aaKnown RBP17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 ALG9Q9H6U8 611 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 STOML2Q9UJZ1 356 aa17.63■□□□□ 0.41
NOTCH3-201ENST00000263388 POMCP01189 267 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 TAF5Q15542 800 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 MTFMTQ96DP5 389 aaKnown RBP17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 TMEM138Q9NPI0 162 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 PARP4Q9UKK3 1724 aaKnown RBP17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 FGRP09769 529 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 PAX7P23759 505 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 SMYD1Q8NB12 490 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 PNPLA3Q9NST1 481 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 AKAP7Q9P0M2 348 aaPredicted RBP17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 KLRK1P26718 216 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 NUMBP49757 651 aa17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 THOC7Q6I9Y2 204 aaKnown RBP17.62■□□□□ 0.41
NOTCH3-201ENST00000263388 IRAK3Q9Y616 596 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms