RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 DOPEY2Q9Y3R5 2298 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 TEX15Q9BXT5 2789 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 NUMA1Q14980 2115 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 FAM187AA6NFU0 413 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 SEC31AO94979 1220 aaKnown RBP13.62□□□□□ -0.23
SGCA-201ENST00000262018 TRUB2O95900 331 aaKnown RBP13.62□□□□□ -0.23
SGCA-201ENST00000262018 RALAP11233 206 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 LCP1P13796 627 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 IL1R2P27930 398 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 MIPP30301 263 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 PTPN9P43378 593 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 FNTAP49354 379 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 COPAP53621 1224 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 VAC14Q08AM6 782 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 TAF5Q15542 800 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 RAB41Q5JT25 222 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 EFHC1Q5JVL4 640 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 SPOCD1Q6ZMY3 1216 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 HTR3DQ70Z44 454 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 CCDC50Q8IVM0 306 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 EIF1ADQ8N9N8 165 aaKnown RBP13.62□□□□□ -0.23
SGCA-201ENST00000262018 CLEC4CQ8WTT0 213 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.62□□□□□ -0.23
SGCA-201ENST00000262018 OVCA2Q8WZ82 227 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 MAGOHBQ96A72 148 aaKnown RBP13.62□□□□□ -0.23
SGCA-201ENST00000262018 BIRC7Q96CA5 298 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 HERPUD2Q9BSE4 406 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 FAM117AQ9C073 453 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 EPB41L5Q9HCM4 733 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 PCYOX1Q9UHG3 505 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 AMACRQ9UHK6 382 aa13.62□□□□□ -0.23
SGCA-201ENST00000262018 FAM92AA1XBS5 289 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 NPC1O15118 1278 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 KLK10O43240 276 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 GRAP2O75791 330 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 FBXO21O94952 628 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 MYBL2P10244 700 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 DESP17661 470 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 CD27P26842 260 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 SDC4P31431 198 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 COILP38432 576 aaPredicted RBP13.61□□□□□ -0.23
SGCA-201ENST00000262018 PTGIRP43119 386 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 GUCY2DQ02846 1103 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 NFATC3Q12968 1075 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 TAZQ16635 292 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 MFSD7Q6UXD7 560 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 KDM7AQ6ZMT4 941 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 GPRIN1Q7Z2K8 1008 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 ANKS1BQ7Z6G8 1248 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 SCAMP5Q8TAC9 235 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 UCMAQ8WVF2 138 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 CASKIN2Q8WXE0 1202 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 SEC14L1Q92503 715 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 RAPGEF5Q92565 580 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 CENPIQ92674 756 aaPredicted RBP13.61□□□□□ -0.23
SGCA-201ENST00000262018 RNF25Q96BH1 459 aaPredicted RBP13.61□□□□□ -0.23
SGCA-201ENST00000262018 ZNF578Q96N58 590 aaPredicted RBP13.61□□□□□ -0.23
SGCA-201ENST00000262018 ELF4Q99607 663 aaPredicted RBP13.61□□□□□ -0.23
SGCA-201ENST00000262018 ACE2Q9BYF1 805 aaPredicted RBP13.61□□□□□ -0.23
SGCA-201ENST00000262018 LRRC4Q9HBW1 653 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 HOMER3Q9NSC5 361 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 LSM7Q9UK45 103 aaKnown RBP13.61□□□□□ -0.23
SGCA-201ENST00000262018 EFR3BQ9Y2G0 817 aa13.61□□□□□ -0.23
SGCA-201ENST00000262018 hCG_1818297A0A087WSY0 165 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 ZSCAN5CA6NGD5 496 aaPredicted RBP13.6□□□□□ -0.23
SGCA-201ENST00000262018 C3orf70A6NLC5 250 aaPredicted RBP13.6□□□□□ -0.23
SGCA-201ENST00000262018 TTI1O43156 1089 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 GREM1O60565 184 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 HSF2BPO75031 334 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 SEMA4FO95754 770 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 EPHX1P07099 455 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 PRKCHP24723 683 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 CDKN2BP42772 138 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 TKTL1P51854 596 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 DR1Q01658 176 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 ADIGQ0VDE8 80 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 ENPP2Q13822 863 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 ZNF234Q14588 700 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 C15orf59Q2T9L4 293 aaPredicted RBP13.6□□□□□ -0.23
SGCA-201ENST00000262018 KIAA1614Q5VZ46 1190 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 TTC27Q6P3X3 843 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 CYP4V2Q6ZWL3 525 aaPredicted RBP13.6□□□□□ -0.23
SGCA-201ENST00000262018 SIX6OS1Q8N1H7 587 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 SAP25Q8TEE9 199 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 AENQ8WTP8 325 aaKnown RBP13.6□□□□□ -0.23
SGCA-201ENST00000262018 KCNE4Q8WWG9 221 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 HIC2Q96JB3 615 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 CFAP57Q96MR6 1250 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 DCLK3Q9C098 648 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 ZWILCHQ9H900 591 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 KLHL11Q9NVR0 708 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 FAM53CQ9NYF3 392 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 SCML2Q9UQR0 700 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 USP3Q9Y6I4 520 aa13.6□□□□□ -0.23
SGCA-201ENST00000262018 LRRD1A4D1F6 860 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 VILLO15195 856 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 TSPAN3O60637 253 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 DAB1O75553 588 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 ENDOD1O94919 500 aa13.59□□□□□ -0.23
SGCA-201ENST00000262018 KDELR1P24390 212 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms