RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 MAGEE1Q9HCI5 957 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 SEMA3GQ9NS98 782 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 FBXO28Q9NVF7 368 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 DZANK1Q9NVP4 752 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ARL15Q9NXU5 204 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 NUDT4Q9NZJ9 180 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ATP6V1HQ9UI12 483 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 SLC9A8Q9Y2E8 581 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 UBE2Q2LH0YL09 131 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PLK4O00444 970 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 COX7A2P14406 83 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 S100GP29377 79 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 VARS2Q5ST30 1063 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PLEKHM3Q6ZWE6 761 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 SH2D3CQ8N5H7 860 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PNPT1Q8TCS8 783 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 MYDGFQ969H8 173 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 AGAP3Q96P47 875 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 NR1H4Q96RI1 486 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PHF11Q9UIL8 331 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ATP11BQ9Y2G3 1177 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 BTAF1O14981 1849 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ARAP2Q8WZ64 1704 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PDZK1P1A8MUH7 402 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ALOX15BO15296 676 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 NPPAP01160 153 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 JCHAINP01591 159 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 EPB42P16452 691 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 GABRB2P47870 512 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 BLKP51451 505 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CDH4P55283 916 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 RAB10P61026 200 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ABRQ12979 859 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 MROH9Q5TGP6 573 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 KCNT2Q6UVM3 1135 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ANKMY2Q8IV38 441 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 UBA3Q8TBC4 463 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 RIPOR3Q96MK2 946 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 TRAPPC9Q96Q05 1148 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 TRIB3Q96RU7 358 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 HMG20AQ9NP66 347 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ETNK2Q9NVF9 386 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 OR12D3Q9UGF7 316 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ST3GAL5Q9UNP4 418 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 GNG14A0A1W2PPG7 69 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 FAM205CA6NFA0 338 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ADCY1Q08828 1119 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 SLC14A2Q15849 920 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ATXN7L2Q5T6C5 722 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 HLA-DQA1Q5Y7H0 255 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ADCK2Q7Z695 626 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 RNF217Q8TC41 542 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 NELL1Q92832 810 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 AKT1S1Q96B36 256 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 TRIT1Q9H3H1 467 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CYP4F11Q9HBI6 524 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 LGALS13Q9UHV8 139 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 DNAJC16Q9Y2G8 782 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 MARF1Q9Y4F3 1742 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 NHSQ6T4R5 1651 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 KLRC4O43908 158 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 VTNP04004 478 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 FECHP22830 423 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PBX3P40426 434 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 NFYCQ13952 458 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CHST9Q7L1S5 443 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 TMC8Q8IU68 726 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 TAB3Q8N5C8 712 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CERS2Q96G23 380 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 OSMRQ99650 979 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 C1orf50Q9BV19 199 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 COL22A1Q8NFW1 1626 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 DDX3XO00571 662 aaKnown RBP eCLIP4.36□□□□□ -1.717e-16■■■■■ 39.8
VPS13C-202ENST00000261517 CLTBP09497 229 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 CRHR1P34998 444 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 GPC1P35052 558 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 ARID3BQ8IVW6 561 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PHACTR4Q8IZ21 702 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 PIWIL2Q8TC59 973 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 C9orf72Q96LT7 481 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 THUMPD3Q9BV44 507 aaKnown RBP4.36□□□□□ -1.71
VPS13C-202ENST00000261517 C3orf18Q9UK00 162 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 RAB23Q9ULC3 237 aa4.36□□□□□ -1.71
VPS13C-202ENST00000261517 KCNJ13O60928 360 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MYL12AP19105 171 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 GTF2E2P29084 291 aaKnown RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 S100A3P33764 101 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 KDSRQ06136 332 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PDE1CQ14123 709 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MZT2AQ6P582 158 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 AGMOQ6ZNB7 445 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SLC2A14Q8TDB8 520 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ASZ1Q8WWH4 475 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 S100ZQ8WXG8 99 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ACDQ96AP0 544 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ITCHQ96J02 903 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SLC38A2Q96QD8 506 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 APOL5Q9BWW9 433 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PHPT1Q9NRX4 125 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 VPS4AQ9UN37 437 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms