RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 CCHCR1Q8TD31 782 aa21.02■□□□□ 0.96
RTCA-201ENST00000260563 FRS2Q8WU20 508 aa21.02■□□□□ 0.96
RTCA-201ENST00000260563 ERP44Q9BS26 406 aa21.02■□□□□ 0.96
RTCA-201ENST00000260563 CINPQ9BW66 212 aaPredicted RBP21.02■□□□□ 0.96
RTCA-201ENST00000260563 PCDH9Q9HC56 1237 aa21.02■□□□□ 0.96
RTCA-201ENST00000260563 RHOAP61586 193 aa21.01■□□□□ 0.95
RTCA-201ENST00000260563 GUCY2DQ02846 1103 aa21.01■□□□□ 0.95
RTCA-201ENST00000260563 ZNF235Q14590 738 aa21.01■□□□□ 0.95
RTCA-201ENST00000260563 ELF2Q15723 593 aa21.01■□□□□ 0.95
RTCA-201ENST00000260563 BBS5Q8N3I7 341 aa21.01■□□□□ 0.95
RTCA-201ENST00000260563 PTPRN2Q92932 1015 aa21.01■□□□□ 0.95
RTCA-201ENST00000260563 FATE1Q969F0 183 aa21.01■□□□□ 0.95
RTCA-201ENST00000260563 ISG20Q96AZ6 181 aaKnown RBP21.01■□□□□ 0.95
RTCA-201ENST00000260563 ERLEC1Q96DZ1 483 aa21.01■□□□□ 0.95
RTCA-201ENST00000260563 HINFPQ9BQA5 517 aa21.01■□□□□ 0.95
RTCA-201ENST00000260563 MTG2Q9H4K7 406 aa21.01■□□□□ 0.95
RTCA-201ENST00000260563 POLMQ9NP87 494 aaPredicted RBP21.01■□□□□ 0.95
RTCA-201ENST00000260563 SEPT10Q9P0V9 454 aa21.01■□□□□ 0.95
RTCA-201ENST00000260563 ASIC3Q9UHC3 531 aa21.01■□□□□ 0.95
RTCA-201ENST00000260563 MATN3O15232 486 aa21■□□□□ 0.95
RTCA-201ENST00000260563 MTSS1O43312 755 aa21■□□□□ 0.95
RTCA-201ENST00000260563 BNIP3LO60238 219 aa21■□□□□ 0.95
RTCA-201ENST00000260563 SIN3BO75182 1162 aa21■□□□□ 0.95
RTCA-201ENST00000260563 PEX11BO96011 259 aa21■□□□□ 0.95
RTCA-201ENST00000260563 ZSCAN5DPP0CG00 497 aa21■□□□□ 0.95
RTCA-201ENST00000260563 COL9A1P20849 921 aa21■□□□□ 0.95
RTCA-201ENST00000260563 ACTN2P35609 894 aa21■□□□□ 0.95
RTCA-201ENST00000260563 RECQLP46063 649 aaPredicted RBP21■□□□□ 0.95
RTCA-201ENST00000260563 DGKEP52429 567 aa21■□□□□ 0.95
RTCA-201ENST00000260563 TERF1P54274 439 aa21■□□□□ 0.95
RTCA-201ENST00000260563 NRLP54845 237 aa21■□□□□ 0.95
RTCA-201ENST00000260563 P3H1Q32P28 736 aa21■□□□□ 0.95
RTCA-201ENST00000260563 TMEM92Q6UXU6 159 aa21■□□□□ 0.95
RTCA-201ENST00000260563 TM6SF2Q9BZW4 377 aa21■□□□□ 0.95
RTCA-201ENST00000260563 TNKS2Q9H2K2 1166 aa21■□□□□ 0.95
RTCA-201ENST00000260563 EPB41L5Q9HCM4 733 aa21■□□□□ 0.95
RTCA-201ENST00000260563 POLR3BQ9NW08 1133 aaPredicted RBP21■□□□□ 0.95
RTCA-201ENST00000260563 C2orf42Q9NWW7 574 aa21■□□□□ 0.95
RTCA-201ENST00000260563 SEPT3Q9UH03 358 aa21■□□□□ 0.95
RTCA-201ENST00000260563 CUL9Q8IWT3 2517 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 UQCRHLA0A096LP55 91 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 A0A1W2PQF6 199 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 TCRBV21S2A2A0A5A6 115 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 C5orf60A6NFR6 353 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 KCNK1O00180 336 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 DLL1O00548 723 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 NEBLO76041 1014 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 STK10O94804 968 aaKnown RBP20.99■□□□□ 0.95
RTCA-201ENST00000260563 UQCRHP07919 91 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 AVPR2P30518 371 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 MMP13P45452 471 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 CXCL12P48061 93 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 SNRPD1P62314 119 aaKnown RBP20.99■□□□□ 0.95
RTCA-201ENST00000260563 SATB1Q01826 763 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 SLC10A7Q0GE19 358 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 CAMK2GQ13555 558 aaPredicted RBP20.99■□□□□ 0.95
RTCA-201ENST00000260563 HNRNPDQ14103 355 aaKnown RBP20.99■□□□□ 0.95
RTCA-201ENST00000260563 CYTH1Q15438 398 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 MARC1Q5VT66 337 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 DUPD1Q68J44 220 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 KIAA1211LQ6NV74 962 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 MAMSTRQ6ZN01 415 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 MAML1Q92585 1016 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 RUBCNQ92622 972 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 TRIM31Q9BZY9 425 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 FBRSQ9HAH7 460 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 PRSS16Q9NQE7 514 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 BHMG1C9JSJ3 638 aaPredicted RBP20.99■□□□□ 0.95
RTCA-201ENST00000260563 RNF103O00237 685 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 ZNF821O75541 412 aaPredicted RBP20.99■□□□□ 0.95
RTCA-201ENST00000260563 GCATO75600 419 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 IGSF6O95976 241 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 GSRP00390 522 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 CCNB1P14635 433 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 PTPN3P26045 913 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 VPS41P49754 854 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 RENBPP51606 427 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 WASHC5Q12768 1159 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 ELAVL3Q14576 367 aaKnown RBP20.99■□□□□ 0.95
RTCA-201ENST00000260563 C9orf64Q5T6V5 341 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 DTWD2Q8NBA8 298 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 TSTD1Q8NFU3 115 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 OR2AP1Q8NGE2 309 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 SEC14L1Q92503 715 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 GDAP1L1Q96MZ0 367 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 HHIPQ96QV1 700 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 DPH5Q9H2P9 285 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 GDF3Q9NR23 364 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 HAUS2Q9NVX0 235 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 LHX3Q9UBR4 397 aa20.99■□□□□ 0.95
RTCA-201ENST00000260563 FARP1Q9Y4F1 1045 aaPredicted RBP20.99■□□□□ 0.95
RTCA-201ENST00000260563 CACNA1IQ9P0X4 2223 aa20.98■□□□□ 0.95
RTCA-201ENST00000260563 ESYT3A0FGR9 886 aa20.98■□□□□ 0.95
RTCA-201ENST00000260563 LAMTOR5O43504 91 aa20.98■□□□□ 0.95
RTCA-201ENST00000260563 PAPSS2O95340 614 aaPredicted RBP20.98■□□□□ 0.95
RTCA-201ENST00000260563 RPL22P35268 128 aaKnown RBP20.98■□□□□ 0.95
RTCA-201ENST00000260563 HSPA9P38646 679 aaKnown RBP20.98■□□□□ 0.95
RTCA-201ENST00000260563 ADCY8P40145 1251 aa20.98■□□□□ 0.95
RTCA-201ENST00000260563 IFI35P80217 286 aaPredicted RBP20.98■□□□□ 0.95
RTCA-201ENST00000260563 CARD16Q5EG05 197 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms