RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 TMCC1O94876 653 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 FSBPO95073 299 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 GSRP00390 522 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 PRNPP04156 253 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 KRT7P08729 469 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 TBC1D3HP0C7X1 549 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 COMTP21964 271 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 KDELR1P24390 212 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 DPP6P42658 865 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 SLC1A1P43005 524 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 RHOAP61586 193 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 SNRPD1P62314 119 aaKnown RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 IRX4P78413 519 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 IL10RBQ08334 325 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 CNTN1Q12860 1018 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 PDK2Q15119 407 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 DUOXA1Q1HG43 343 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 MYLK3Q32MK0 819 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 AASDHQ4L235 1098 aaPredicted RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 ANKRD20A8PQ5CZ79 823 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 TRIM61Q5EBN2 209 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 WDR45BQ5MNZ6 344 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 ZFYVE27Q5T4F4 411 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 ATXN7L2Q5T6C5 722 aaPredicted RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 PEAR1Q5VY43 1037 aaPredicted RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 TBC1D3GQ6DHY5 549 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 TBC1D3CQ6IPX1 549 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 SLC23A3Q6PIS1 610 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 NCEH1Q6PIU2 408 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 MAP7D3Q8IWC1 876 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 TBC1D3Q8IZP1 549 aaPredicted RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 C12orf50Q8NA57 414 aaPredicted RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 OR6K2Q8NGY2 324 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 PCDH19Q8TAB3 1148 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 GRIN3AQ8TCU5 1115 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 CASKIN2Q8WXE0 1202 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 DNASE2BQ8WZ79 361 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 FAM131CQ96AQ9 280 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 VOPP1Q96AW1 172 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 CALN1Q9BXU9 219 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 MIR1-1HGQ9H1L0 117 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 PCED1AQ9H1Q7 454 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 ZDHHC6Q9H6R6 413 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 SLC24A3Q9HC58 644 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 LUC7LQ9NQ29 371 aaKnown RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 RCOR3Q9P2K3 495 aaPredicted RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 UBA2Q9UBT2 640 aaPredicted RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 EIF2B4Q9UI10 523 aaKnown RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 SALL4Q9UJQ4 1053 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 REXO2Q9Y3B8 237 aaKnown RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 ALG6Q9Y672 507 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 A0A0A6YYK5 440 aaPredicted RBP8.65□□□□□ -1.02
TMEM258-201ENST00000257262 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.65□□□□□ -1.02
TMEM258-201ENST00000257262 LRRC72A6NJI9 287 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 PRR5-ARHGAP8B1AHC4 643 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 SLC7A4O43246 635 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 PLRG1O43660 514 aaKnown RBP8.65□□□□□ -1.02
TMEM258-201ENST00000257262 FOXD2O60548 495 aaPredicted RBP8.65□□□□□ -1.02
TMEM258-201ENST00000257262 BUB1BO60566 1050 aaPredicted RBP8.65□□□□□ -1.02
TMEM258-201ENST00000257262 PALMO75781 387 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 IPO7O95373 1038 aaKnown RBP8.65□□□□□ -1.02
TMEM258-201ENST00000257262 POP4O95707 220 aaKnown RBP8.65□□□□□ -1.02
TMEM258-201ENST00000257262 IGSF6O95976 241 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 IGHV4-34P06331 123 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 SERPINF2P08697 491 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 TNNT1P13805 278 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 ADPRHP54922 357 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 TAS2R38P59533 333 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 ARHGAP8P85298 464 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 LMNB2Q03252 620 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 PIP5KL1Q5T9C9 394 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 AGBL4Q5VU57 503 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 KIAA0895LQ68EN5 471 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 NCBP2-AS2Q69YL0 99 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 GDPD4Q6W3E5 623 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 RHOT1Q8IXI2 618 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 ACRBPQ8NEB7 543 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 OR2T34Q8NGX1 318 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 C1orf216Q8TAB5 229 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 CEP76Q8TAP6 659 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 SNX19Q92543 992 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 RAPGEF5Q92565 580 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 PPP1R16AQ96I34 528 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 EXOC2Q96KP1 924 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 GDAP1L1Q96MZ0 367 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 RNF157Q96PX1 679 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 ZNF670Q9BS34 389 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 NUSAP1Q9BXS6 441 aaKnown RBP8.65□□□□□ -1.02
TMEM258-201ENST00000257262 KDM4CQ9H3R0 1056 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 GOLPH3Q9H4A6 298 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 EBF2Q9HAK2 575 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 SP110Q9HB58 689 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 FSCN3Q9NQT6 498 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 DYRK4Q9NR20 520 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 LHX3Q9UBR4 397 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 EVLQ9UI08 416 aaPredicted RBP8.65□□□□□ -1.02
TMEM258-201ENST00000257262 IPO11Q9UI26 975 aaKnown RBP8.65□□□□□ -1.02
TMEM258-201ENST00000257262 SLC6A14Q9UN76 642 aa8.65□□□□□ -1.02
TMEM258-201ENST00000257262 SLCO1B1Q9Y6L6 691 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms