RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 ZPBP2Q6X784 338 aa17.08■□□□□ 0.33
SORT1-201ENST00000256637 NPLOC4Q8TAT6 608 aa17.08■□□□□ 0.33
SORT1-201ENST00000256637 SELENOMQ8WWX9 145 aa17.08■□□□□ 0.33
SORT1-201ENST00000256637 A0A1W2PQJ5 194 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 OC90Q02509 493 aaPredicted RBP17.08■□□□□ 0.32
SORT1-201ENST00000256637 KLC1Q07866 573 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 VARS2Q5ST30 1063 aaKnown RBP17.08■□□□□ 0.32
SORT1-201ENST00000256637 RAD51AP1Q96B01 352 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 S100A13Q99584 98 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 TMEM134Q9H6X4 195 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 ERVK-11Q9UQG0 969 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 A0A1W2PQ45 241 aaPredicted RBP17.08■□□□□ 0.32
SORT1-201ENST00000256637 A0A1W2PQY0 241 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 PRCCQ92733 491 aaPredicted RBP17.08■□□□□ 0.32
SORT1-201ENST00000256637 MYO19Q96H55 970 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 HOXA10P31260 410 aaPredicted RBP17.08■□□□□ 0.32
SORT1-201ENST00000256637 XKR4Q5GH76 650 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 N4BP2L1Q5TBK1 243 aaPredicted RBP17.08■□□□□ 0.32
SORT1-201ENST00000256637 TMPRSS11BQ86T26 416 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 ZDHHC17Q8IUH5 632 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 NEK7Q8TDX7 302 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.08■□□□□ 0.32
SORT1-201ENST00000256637 SLC1A6P48664 564 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 NPY2RP49146 381 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 ATXN7L2Q5T6C5 722 aaPredicted RBP17.08■□□□□ 0.32
SORT1-201ENST00000256637 CMTM5Q96DZ9 223 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 ZNF354BQ96LW1 612 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 NMUR1Q9HB89 426 aa17.08■□□□□ 0.32
SORT1-201ENST00000256637 KRT6AP02538 564 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 KRT6BP04259 564 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 KRT16P08779 473 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 ELK3P41970 407 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 KRT6CP48668 564 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 PIK3CGP48736 1102 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 KLHL24Q6TFL4 600 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 MMAAQ8IVH4 418 aaKnown RBP17.07■□□□□ 0.32
SORT1-201ENST00000256637 TC2NQ8N9U0 490 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 FTH1P02794 183 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 NT5EP21589 574 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 SEPHS1P49903 392 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 USP4Q13107 963 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 FBXO48Q5FWF7 155 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 TMEM120AQ9BXJ8 343 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 SLIT1O75093 1534 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 SOWAHBA6NEL2 793 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 SLC38A8A6NNN8 435 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 TMEM114B3SHH9 223 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 CYLC2Q14093 348 aaPredicted RBP17.07■□□□□ 0.32
SORT1-201ENST00000256637 DGKKQ5KSL6 1271 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 PDPK2PQ6A1A2 396 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 TP53INP1Q96A56 240 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 OSBPL1AQ9BXW6 950 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 ARHGAP39Q9C0H5 1083 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 ACTR5Q9H9F9 607 aaPredicted RBP17.07■□□□□ 0.32
SORT1-201ENST00000256637 ZNF862O60290 1169 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 SSTR1P30872 391 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 TRMT61BQ9BVS5 477 aaKnown RBP17.07■□□□□ 0.32
SORT1-201ENST00000256637 PAPSS1O43252 624 aaPredicted RBP17.07■□□□□ 0.32
SORT1-201ENST00000256637 CARTPTQ16568 116 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 RHBDF2Q6PJF5 856 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 MCCC2Q9HCC0 563 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 ARHGEF4Q9NR80 690 aa17.07■□□□□ 0.32
SORT1-201ENST00000256637 CFAP20Q9Y6A4 193 aaKnown RBP17.07■□□□□ 0.32
SORT1-201ENST00000256637 PSMD10O75832 226 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 IGFALSP35858 605 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 PPP3CAQ08209 521 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 MTAPQ13126 283 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 ZDHHC4Q9NPG8 344 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 ZNF510Q9Y2H8 683 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 PDE2AO00408 941 aaPredicted RBP17.06■□□□□ 0.32
SORT1-201ENST00000256637 CLK1P49759 484 aaKnown RBP17.06■□□□□ 0.32
SORT1-201ENST00000256637 MYBPC1Q00872 1141 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 TUSC3Q13454 348 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 ZNF268Q14587 947 aaPredicted RBP17.06■□□□□ 0.32
SORT1-201ENST00000256637 PAGE2BQ5JRK9 111 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 CPA3P15088 417 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 DGKGP49619 791 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 GNA13Q14344 377 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 ARSIQ5FYB1 569 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 PIGKQ92643 395 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 FCRL2Q96LA5 508 aaPredicted RBP17.06■□□□□ 0.32
SORT1-201ENST00000256637 LDAHQ9H6V9 325 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
SORT1-201ENST00000256637 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.06■□□□□ 0.32
SORT1-201ENST00000256637 CDH16O75309 829 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 ATP5HO75947 161 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 STX4Q12846 297 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 ITGA9Q13797 1035 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 NPEPPSL1A6NEC2 478 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 NBNO60934 754 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 ERBB2P04626 1255 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 ANXA6P08133 673 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 NUP107P57740 925 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 TEAD2Q15562 447 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 E2F4Q16254 413 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 ECM1Q16610 540 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 C12orf76Q8N812 135 aaPredicted RBP17.06■□□□□ 0.32
SORT1-201ENST00000256637 TLR9Q9NR96 1032 aa17.06■□□□□ 0.32
SORT1-201ENST00000256637 DDX28Q9NUL7 540 aaKnown RBP17.06■□□□□ 0.32
SORT1-201ENST00000256637 FRMPD4Q14CM0 1322 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms