RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 MYLK3Q32MK0 819 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 ATXN7L2Q5T6C5 722 aaPredicted RBP25.48■■□□□ 1.67
LSM7-201ENST00000252622 TBC1D3GQ6DHY5 549 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 TBC1D3CQ6IPX1 549 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 TRIM69Q86WT6 500 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 TBC1D3Q8IZP1 549 aaPredicted RBP25.48■■□□□ 1.67
LSM7-201ENST00000252622 OR6K2Q8NGY2 324 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 VOPP1Q96AW1 172 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 ZNF670Q9BS34 389 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 OSBPL1AQ9BXW6 950 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 ZDHHC5Q9C0B5 715 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 SP110Q9HB58 689 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 TM9SF3Q9HD45 589 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 FSCN3Q9NQT6 498 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 LHX3Q9UBR4 397 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 MFHAS1Q9Y4C4 1052 aa25.48■■□□□ 1.67
LSM7-201ENST00000252622 C4orf47A7E2U8 309 aa25.47■■□□□ 1.67
LSM7-201ENST00000252622 LATO43561 262 aa25.47■■□□□ 1.67
LSM7-201ENST00000252622 CD48P09326 243 aa25.47■■□□□ 1.67
LSM7-201ENST00000252622 AFF3P51826 1226 aaKnown RBP25.47■■□□□ 1.67
LSM7-201ENST00000252622 NEK3P51956 506 aa25.47■■□□□ 1.67
LSM7-201ENST00000252622 PPP2CBP62714 309 aa25.47■■□□□ 1.67
LSM7-201ENST00000252622 PPP2CAP67775 309 aa25.47■■□□□ 1.67
LSM7-201ENST00000252622 IL10RBQ08334 325 aa25.47■■□□□ 1.67
LSM7-201ENST00000252622 ATP13A4Q4VNC1 1196 aa25.47■■□□□ 1.67
LSM7-201ENST00000252622 MAP7D3Q8IWC1 876 aa25.47■■□□□ 1.67
LSM7-201ENST00000252622 LUC7LQ9NQ29 371 aaKnown RBP25.47■■□□□ 1.67
LSM7-201ENST00000252622 IPO11Q9UI26 975 aaKnown RBP25.47■■□□□ 1.67
LSM7-201ENST00000252622 SLCO1B1Q9Y6L6 691 aa25.47■■□□□ 1.67
LSM7-201ENST00000252622 LAMA1P25391 3075 aa25.47■■□□□ 1.67
LSM7-201ENST00000252622 DCHS1Q96JQ0 3298 aa25.47■■□□□ 1.67
LSM7-201ENST00000252622 CACNA1EQ15878 2313 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 KRIT1O00522 736 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 NUDT1P36639 197 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 MAPK8P45983 427 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 GRIA4P48058 902 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 ATXN3P54252 364 aaPredicted RBP25.46■■□□□ 1.67
LSM7-201ENST00000252622 HADHBP55084 474 aaKnown RBP25.46■■□□□ 1.67
LSM7-201ENST00000252622 RAD51Q06609 339 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 GRIK2Q13002 908 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 RFTN1Q14699 578 aaPredicted RBP25.46■■□□□ 1.67
LSM7-201ENST00000252622 NEK5Q6P3R8 708 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 ARHGAP36Q6ZRI8 547 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 TP53INP2Q8IXH6 220 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 NETO2Q8NC67 525 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 KCTD6Q8NC69 237 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 EBF2Q9HAK2 575 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 IMPACTQ9P2X3 320 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 PCDHA13Q9Y5I0 950 aa25.46■■□□□ 1.67
LSM7-201ENST00000252622 SOWAHDA6NJG2 315 aa25.45■■□□□ 1.66
LSM7-201ENST00000252622 TM4SF5O14894 197 aa25.45■■□□□ 1.66
LSM7-201ENST00000252622 GKP32189 559 aa25.45■■□□□ 1.66
LSM7-201ENST00000252622 SLC1A1P43005 524 aa25.45■■□□□ 1.66
LSM7-201ENST00000252622 RACK1P63244 317 aaKnown RBP25.45■■□□□ 1.66
LSM7-201ENST00000252622 MMRN1Q13201 1228 aa25.45■■□□□ 1.66
LSM7-201ENST00000252622 TEAD4Q15561 434 aa25.45■■□□□ 1.66
LSM7-201ENST00000252622 ZNF805Q5CZA5 627 aa25.45■■□□□ 1.66
LSM7-201ENST00000252622 PARS2Q7L3T8 475 aaKnown RBP25.45■■□□□ 1.66
LSM7-201ENST00000252622 FAF2Q96CS3 445 aa25.45■■□□□ 1.66
LSM7-201ENST00000252622 ZNF599Q96NL3 588 aa25.45■■□□□ 1.66
LSM7-201ENST00000252622 GTPBP2Q9BX10 602 aaKnown RBP25.45■■□□□ 1.66
LSM7-201ENST00000252622 CALN1Q9BXU9 219 aa25.45■■□□□ 1.66
LSM7-201ENST00000252622 KLHL11Q9NVR0 708 aa25.45■■□□□ 1.66
LSM7-201ENST00000252622 EPN1Q9Y6I3 576 aaPredicted RBP25.45■■□□□ 1.66
LSM7-201ENST00000252622 PALMO75781 387 aa25.44■■□□□ 1.66
LSM7-201ENST00000252622 NDUFA10O95299 355 aa25.44■■□□□ 1.66
LSM7-201ENST00000252622 UGT2B4P06133 528 aa25.44■■□□□ 1.66
LSM7-201ENST00000252622 ADRB3P13945 408 aa25.44■■□□□ 1.66
LSM7-201ENST00000252622 LRRC38Q5VT99 294 aa25.44■■□□□ 1.66
LSM7-201ENST00000252622 DGLUCYQ7Z3D6 616 aa25.44■■□□□ 1.66
LSM7-201ENST00000252622 PRPF39Q86UA1 669 aaKnown RBP25.44■■□□□ 1.66
LSM7-201ENST00000252622 MINDY1Q8N5J2 469 aa25.44■■□□□ 1.66
LSM7-201ENST00000252622 CPEB1Q9BZB8 566 aaKnown RBP25.44■■□□□ 1.66
LSM7-201ENST00000252622 DMTF1Q9Y222 760 aa25.44■■□□□ 1.66
LSM7-201ENST00000252622 A0A0A6YYK5 440 aaPredicted RBP25.43■■□□□ 1.66
LSM7-201ENST00000252622 AP1G1O43747 822 aa25.43■■□□□ 1.66
LSM7-201ENST00000252622 CSNK1DP48730 415 aa25.43■■□□□ 1.66
LSM7-201ENST00000252622 GRM3Q14832 879 aa25.43■■□□□ 1.66
LSM7-201ENST00000252622 PAFAH1B3Q15102 231 aaKnown RBP25.43■■□□□ 1.66
LSM7-201ENST00000252622 ANKRD20A8PQ5CZ79 823 aa25.43■■□□□ 1.66
LSM7-201ENST00000252622 TMCO4Q5TGY1 634 aa25.43■■□□□ 1.66
LSM7-201ENST00000252622 FBXL19Q6PCT2 694 aa25.43■■□□□ 1.66
LSM7-201ENST00000252622 GDPD4Q6W3E5 623 aa25.43■■□□□ 1.66
LSM7-201ENST00000252622 ATPAF2Q8N5M1 289 aa25.43■■□□□ 1.66
LSM7-201ENST00000252622 PCDH19Q8TAB3 1148 aa25.43■■□□□ 1.66
LSM7-201ENST00000252622 RAB7BQ96AH8 199 aa25.43■■□□□ 1.66
LSM7-201ENST00000252622 EXOC2Q96KP1 924 aa25.43■■□□□ 1.66
LSM7-201ENST00000252622 SLC6A18Q96N87 628 aa25.43■■□□□ 1.66
LSM7-201ENST00000252622 CINPQ9BW66 212 aaPredicted RBP25.43■■□□□ 1.66
LSM7-201ENST00000252622 DNAH14Q0VDD8 3507 aa25.42■■□□□ 1.66
LSM7-201ENST00000252622 A0A1B0GVT2 93 aa25.42■■□□□ 1.66
LSM7-201ENST00000252622 C16orf96A6NNT2 1141 aa25.42■■□□□ 1.66
LSM7-201ENST00000252622 ZNF487B1APH4 448 aa25.42■■□□□ 1.66
LSM7-201ENST00000252622 RNGTTO60942 597 aaKnown RBP25.42■■□□□ 1.66
LSM7-201ENST00000252622 IPO7O95373 1038 aaKnown RBP25.42■■□□□ 1.66
LSM7-201ENST00000252622 CSNK1EP49674 416 aaKnown RBP25.42■■□□□ 1.66
LSM7-201ENST00000252622 BNC1Q01954 994 aa25.42■■□□□ 1.66
LSM7-201ENST00000252622 SETMARQ53H47 684 aaPredicted RBP25.42■■□□□ 1.66
LSM7-201ENST00000252622 NCBP2-AS2Q69YL0 99 aa25.42■■□□□ 1.66
LSM7-201ENST00000252622 NAPEPLDQ6IQ20 393 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms