RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 BTRCQ9Y297 605 aa12.12□□□□□ -0.47
USHBP1-201ENST00000252597 C7orf72A4D263 438 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 PSMD12O00232 456 aaPredicted RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 MATN2O00339 956 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 AHSGP02765 367 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 GNAO1P09471 354 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 LRPAP1P30533 357 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 HARS2P49590 506 aaKnown RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 TAS2R39P59534 338 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 HPCAP84074 193 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 WSCD1Q658N2 575 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 C16orf87Q6PH81 154 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 PDZD4Q76G19 769 aaPredicted RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 CEP97Q8IW35 865 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 RP9Q8TA86 221 aaKnown RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 DNAJB14Q8TBM8 379 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 CANT1Q8WVQ1 401 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 PABPC5Q96DU9 382 aaKnown RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 YJEFN3A6XGL0 299 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 ZNF195O14628 629 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 INPP4BO15327 924 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 TADA2AO75478 443 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 LGALS2P05162 132 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 MATKP42679 507 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 NAA20P61599 178 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 PPP1R8Q12972 351 aaKnown RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 MGAT5BQ3V5L5 792 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 OGFRL1Q5TC84 451 aaPredicted RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 CBR4Q8N4T8 237 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 NPWQ8N729 165 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 CXorf38Q8TB03 319 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 KLRG1Q96E93 195 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 HBEGFQ99075 208 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 TKTL2Q9H0I9 626 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 WDCPQ9H6R7 721 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 ALG9Q9H6U8 611 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 PTTG2Q9NZH5 202 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 WARS2Q9UGM6 360 aaKnown RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 MTF2Q9Y483 593 aaPredicted RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 HEATR9A2RTY3 570 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 H3BRB1 525 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 CCDC166P0CW27 439 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 CDK4P11802 303 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 PCNAP12004 261 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 NCK1P16333 377 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 NR1H2P55055 460 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 ZNF423Q2M1K9 1284 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 ACBD5Q5T8D3 534 aaPredicted RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 KLC3Q6P597 504 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 TFAP2DQ7Z6R9 452 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 TMEM110Q86TL2 294 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 FAM35AQ86V20 835 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 ANKRD52Q8NB46 1076 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 HAUS8Q9BT25 410 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 NAT9Q9BTE0 207 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 EFHD1Q9BUP0 239 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 TUT1Q9H6E5 874 aaKnown RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 OXSMQ9NWU1 459 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 NCKIPSDQ9NZQ3 722 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 RSL24D1Q9UHA3 163 aaKnown RBP12.11□□□□□ -0.47
USHBP1-201ENST00000252597 MYRFQ9Y2G1 1151 aa12.11□□□□□ -0.47
USHBP1-201ENST00000252597 ANKRD33BA6NCL7 494 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 GRID2O43424 1007 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 TSPAN1O60635 241 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 BAIAP3O94812 1187 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 PARNO95453 639 aaKnown RBP12.1□□□□□ -0.47
USHBP1-201ENST00000252597 MYL4P12829 197 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 SLC5A3P53794 718 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 NSUN2Q08J23 767 aaKnown RBP eCLIP12.1□□□□□ -0.47
USHBP1-201ENST00000252597 VPS26BQ4G0F5 336 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 RBM20Q5T481 1227 aaKnown RBP12.1□□□□□ -0.47
USHBP1-201ENST00000252597 CNSTQ6PJW8 725 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 ESAMQ96AP7 390 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 BTBD9Q96Q07 612 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 MRPS26Q9BYN8 205 aaKnown RBP12.1□□□□□ -0.47
USHBP1-201ENST00000252597 ADNPQ9H2P0 1102 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 MRPL46Q9H2W6 279 aaKnown RBP12.1□□□□□ -0.47
USHBP1-201ENST00000252597 OR12D3Q9UGF7 316 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 EBF1Q9UH73 591 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 CDC14AQ9UNH5 594 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 A0A0J9YVX5 310 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 HNRNPDQ14103 355 aaKnown RBP12.1□□□□□ -0.47
USHBP1-201ENST00000252597 ANKDD1AQ495B1 522 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 C9orf131Q5VYM1 1079 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 FAM91A1Q658Y4 838 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 TIFABQ6ZNK6 161 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 FASTKD5Q7L8L6 764 aaKnown RBP12.1□□□□□ -0.47
USHBP1-201ENST00000252597 GPR141Q7Z602 305 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 MAGEE2Q8TD90 523 aaPredicted RBP12.1□□□□□ -0.47
USHBP1-201ENST00000252597 HEXDCQ8WVB3 486 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 VPS50Q96JG6 964 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 HAPLN3Q96S86 360 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 CCDC90BQ9GZT6 254 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 ARMC7Q9H6L4 198 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 GPRC5DQ9NZD1 345 aa12.1□□□□□ -0.47
USHBP1-201ENST00000252597 PRORSD1PA6NEY8 169 aa12.09□□□□□ -0.47
USHBP1-201ENST00000252597 OR51F1A6NGY5 319 aa12.09□□□□□ -0.47
USHBP1-201ENST00000252597 J3QRK9 145 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms