RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 NSUN2Q08J23 767 aaKnown RBP eCLIP14.39□□□□□ -0.11
SDF2-201ENST00000247020 MGAT5Q09328 741 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 OLIG2Q13516 323 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 LAMB3Q13751 1172 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 EFTUD2Q15029 972 aaKnown RBP eCLIP14.39□□□□□ -0.11
SDF2-201ENST00000247020 CERCAMQ5T4B2 595 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 GRASPQ7Z6J2 395 aaPredicted RBP14.39□□□□□ -0.11
SDF2-201ENST00000247020 PPHLN1Q8NEY8 458 aaKnown RBP14.39□□□□□ -0.11
SDF2-201ENST00000247020 MZB1Q8WU39 189 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 SMG7Q92540 1137 aaKnown RBP14.39□□□□□ -0.11
SDF2-201ENST00000247020 ALG14Q96F25 216 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 CERS2Q96G23 380 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 SEMA3CQ99985 751 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 C2orf49Q9BVC5 232 aaPredicted RBP14.39□□□□□ -0.11
SDF2-201ENST00000247020 PIDD1Q9HB75 910 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 NSMCE4AQ9NXX6 385 aa14.39□□□□□ -0.11
SDF2-201ENST00000247020 SMG5Q9UPR3 1016 aaKnown RBP14.39□□□□□ -0.11
SDF2-201ENST00000247020 MRPS23Q9Y3D9 190 aaKnown RBP14.39□□□□□ -0.11
SDF2-201ENST00000247020 ARIH1Q9Y4X5 557 aaPredicted RBP14.39□□□□□ -0.11
SDF2-201ENST00000247020 ANKRD36A6QL64 1941 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 ZCWPW2A0A1B0GU75 182 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 FGF1P05230 155 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 BRAFP15056 766 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 CR2P20023 1033 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 ADRA1DP25100 572 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 BMP8BP34820 402 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 MAXP61244 160 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 CRADDP78560 199 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 DNAJC3Q13217 504 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 ANKRD20A4Q4UJ75 823 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 RETSATQ6NUM9 610 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 CTAGE3PQ8IX95 158 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 SRRM1Q8IYB3 904 aaKnown RBP14.38□□□□□ -0.11
SDF2-201ENST00000247020 PPM1NQ8N819 430 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 ZNF669Q96BR6 464 aaPredicted RBP14.38□□□□□ -0.11
SDF2-201ENST00000247020 NUDCD1Q96RS6 583 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 SMC6Q96SB8 1091 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 SELENOSQ9BQE4 189 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 TRABDQ9H4I3 376 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 VPS28Q9UK41 221 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 TCAF1Q9Y4C2 921 aa14.38□□□□□ -0.11
SDF2-201ENST00000247020 HEATR9A2RTY3 570 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 CCDC85CA6NKD9 419 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 CBX4O00257 560 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 INSIG1O15503 277 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 ATP9BO43861 1147 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 PAPSS2O95340 614 aaPredicted RBP14.37□□□□□ -0.11
SDF2-201ENST00000247020 PENKP01210 267 aaPredicted RBP14.37□□□□□ -0.11
SDF2-201ENST00000247020 SNRPAP09012 282 aaKnown RBP14.37□□□□□ -0.11
SDF2-201ENST00000247020 PAMP19021 973 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 GBP2P32456 591 aaPredicted RBP14.37□□□□□ -0.11
SDF2-201ENST00000247020 CSKP41240 450 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 NRIP1P48552 1158 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 SERPINH1P50454 418 aaKnown RBP14.37□□□□□ -0.11
SDF2-201ENST00000247020 CDK18Q07002 472 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 SLC20A2Q08357 652 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 SLC1A5Q15758 541 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 FSCBQ5H9T9 825 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 PDPK2PQ6A1A2 396 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 PKN3Q6P5Z2 889 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 TRMT10BQ6PF06 316 aaKnown RBP14.37□□□□□ -0.11
SDF2-201ENST00000247020 TMEM184AQ6ZMB5 413 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 NLRP9Q7RTR0 991 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 RBM23Q86U06 439 aaKnown RBP14.37□□□□□ -0.11
SDF2-201ENST00000247020 PEX13Q92968 403 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 MRPL38Q96DV4 380 aaKnown RBP14.37□□□□□ -0.11
SDF2-201ENST00000247020 APOL2Q9BQE5 337 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 SMYD2Q9NRG4 433 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 PIH1D1Q9NWS0 290 aaKnown RBP14.37□□□□□ -0.11
SDF2-201ENST00000247020 MARK1Q9P0L2 795 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 CCL26Q9Y258 94 aa14.37□□□□□ -0.11
SDF2-201ENST00000247020 KIF26AQ9ULI4 1882 aaPredicted RBP14.37□□□□□ -0.11
SDF2-201ENST00000247020 MUSKO15146 869 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 CD160O95971 181 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 CHN1P15882 459 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 CEBPBP17676 345 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 GLDCP23378 1020 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 MZF1P28698 734 aaPredicted RBP14.36□□□□□ -0.11
SDF2-201ENST00000247020 GNGT1P63211 74 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 CYTH1Q15438 398 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 CELF5Q8N6W0 485 aaKnown RBP14.36□□□□□ -0.11
SDF2-201ENST00000247020 GABPB2Q8TAK5 448 aaPredicted RBP14.36□□□□□ -0.11
SDF2-201ENST00000247020 GDPD5Q8WTR4 605 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 IFT43Q96FT9 208 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 SGSM3Q96HU1 749 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 CPNE1Q99829 537 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.36□□□□□ -0.11
SDF2-201ENST00000247020 ZFATQ9P243 1243 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 VPS51Q9UID3 782 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 RIMKLBQ9ULI2 386 aa14.36□□□□□ -0.11
SDF2-201ENST00000247020 TMEM120BA0PK00 339 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 CXorf49A8MYA2 514 aaPredicted RBP14.35□□□□□ -0.11
SDF2-201ENST00000247020 TMCC1O94876 653 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 PRAMEF12O95522 483 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 ATXN1LP0C7T5 689 aaKnown RBP14.35□□□□□ -0.11
SDF2-201ENST00000247020 ALADP13716 330 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 CA4P22748 312 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 CSNK1DP48730 415 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 NTHL1P78549 312 aa14.35□□□□□ -0.11
SDF2-201ENST00000247020 MSLNQ13421 630 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms