RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 XYLT2Q9H1B5 865 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 ATP13A3Q9H7F0 1226 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 RXFP1Q9HBX9 757 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 PRDM6Q9NQX0 595 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 ITM2CQ9NQX7 267 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 GDF3Q9NR23 364 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 RBM12Q9NTZ6 932 aaKnown RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 ABI2Q9NYB9 513 aaPredicted RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 STOML1Q9UBI4 398 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 AGO2Q9UKV8 859 aaKnown RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 SATB2Q9UPW6 733 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 COQ4Q9Y3A0 265 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 DUSP10Q9Y6W6 482 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 LAMA2P24043 3122 aaKnown RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 SMIM28A0A1B0GU29 152 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 K7EPI3 171 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 K7ERI5 159 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 PFDN6O15212 129 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 HDAC3O15379 428 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 OPHN1O60890 802 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 TBX10O75333 385 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 TUSC2O75896 110 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 UNC5CO95185 931 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 VNN1O95497 513 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 STAG3L1P0CL83 205 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 CKMT1AP12532 417 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 IDEP14735 1019 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 ATP5DP30049 168 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 CXCR5P32302 372 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 BMPR1AP36894 532 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 HSPA9P38646 679 aaKnown RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 SLC11A1P49279 550 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 PRIM2P49643 509 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 ENTPD1P49961 510 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 RABGGTBP53611 331 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 RPS3AP61247 264 aaKnown RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 ASIC1P78348 528 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 PPP2R2BQ00005 443 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 IFITM2Q01629 132 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 LRRC63Q05C16 580 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 ZBTB17Q13105 803 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 ADGRE1Q14246 886 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 CCDC6Q16204 474 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 PARP6Q2NL67 630 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 NOMO2Q5JPE7 1267 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 HECTD3Q5T447 861 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 SLFN12LQ6IEE8 588 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 KIAA1211LQ6NV74 962 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 C8orf74Q6P047 294 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 CATSPER4Q7RTX7 472 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 DDX53Q86TM3 631 aaKnown RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 SLC51BQ86UW2 128 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 ITIH5Q86UX2 942 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 RALGPS2Q86X27 583 aaPredicted RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 ZNF280BQ86YH2 543 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 ST13P4Q8IZP2 240 aaPredicted RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 ELMOD1Q8N336 334 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 METTL25Q8N6Q8 603 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 CLRN3Q8NCR9 226 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 PDZD8Q8NEN9 1154 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 LILRB4Q8NHJ6 448 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 SLC22A17Q8WUG5 538 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 STON2Q8WXE9 905 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 HDAC2Q92769 488 aaKnown RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 FAR2Q96K12 515 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 ZNF668Q96K58 619 aaPredicted RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 RAB3IPQ96QF0 476 aaPredicted RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 ZNF184Q99676 751 aaPredicted RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 RTP3Q9BQQ7 232 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 CCDC28BQ9BUN5 200 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 LGR4Q9BXB1 951 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 ADAM7Q9H2U9 754 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 NKX2-4Q9H2Z4 354 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 ASB7Q9H672 318 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 LIN7BQ9HAP6 207 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 NEK6Q9HC98 313 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 PALMDQ9NP74 551 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 GID8Q9NWU2 228 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 UCKL1Q9NWZ5 548 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 HSPBP1Q9NZL4 362 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 NDUFA13Q9P0J0 144 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 GMIPQ9P107 970 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 PCSK1NQ9UHG2 260 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 XPO7Q9UIA9 1087 aaKnown RBP3.72□□□□□ -1.81
UFM1-201ENST00000239878 ATPIF1Q9UII2 106 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 RWDD2AQ9UIY3 292 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 NME7Q9Y5B8 376 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 PCDHGB6Q9Y5F9 930 aa3.72□□□□□ -1.81
UFM1-201ENST00000239878 TRIP11Q15643 1979 aa3.71□□□□□ -1.81
UFM1-201ENST00000239878 GREB1Q4ZG55 1949 aa3.71□□□□□ -1.82
UFM1-201ENST00000239878 A0A1B0GTH6 734 aa3.71□□□□□ -1.82
UFM1-201ENST00000239878 SMIM31A0A1B0GVY4 71 aa3.71□□□□□ -1.82
UFM1-201ENST00000239878 CCDC160A6NGH7 325 aa3.71□□□□□ -1.82
UFM1-201ENST00000239878 GOLGA8MH3BSY2 632 aa3.71□□□□□ -1.82
UFM1-201ENST00000239878 AQP9O43315 295 aa3.71□□□□□ -1.82
UFM1-201ENST00000239878 HEXIM1O94992 359 aaKnown RBP3.71□□□□□ -1.82
UFM1-201ENST00000239878 IL18RAPO95256 599 aa3.71□□□□□ -1.82
UFM1-201ENST00000239878 TBX18O95935 607 aa3.71□□□□□ -1.82
UFM1-201ENST00000239878 C4BPAP04003 597 aaKnown RBP3.71□□□□□ -1.82
UFM1-201ENST00000239878 ITGB1P05556 798 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms