RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 NUDT17P0C025 328 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 PDX1P52945 283 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 SP3Q02447 781 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 MYO1HQ8N1T3 1032 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 TRPV1Q8NER1 839 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 ANKS1AQ92625 1134 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 AIFM2Q9BRQ8 373 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 STOX2Q9P2F5 926 aaPredicted RBP11.21□□□□□ -0.61
MSH6-201ENST00000234420 RAPGEFL1Q9UHV5 662 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 GRIP1Q9Y3R0 1128 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 CASZ1Q86V15 1759 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 RGSL1A5PLK6 1076 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 H3BMM5 538 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 CHL1O00533 1208 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 GNAO1P09471 354 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 AP2S1P53680 142 aaPredicted RBP11.21□□□□□ -0.61
MSH6-201ENST00000234420 MED22Q15528 200 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 GALNT18Q6P9A2 607 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 SHC4Q6S5L8 630 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 CHIAQ9BZP6 476 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 TPK1Q9H3S4 243 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 LRRC4BQ9NT99 713 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 IRAK3Q9Y616 596 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 IRS2Q9Y4H2 1338 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 NEDD8-MDP1E9PL57 170 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 FAM227AF5H4B4 570 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 TM9SF1O15321 606 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 EPORP19235 508 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 GCLCP48506 637 aaPredicted RBP11.21□□□□□ -0.61
MSH6-201ENST00000234420 SLC9A3P48764 834 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 CDKL1Q00532 357 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 PFKPQ01813 784 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 ITGA7Q13683 1181 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 DEF8Q6ZN54 512 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 KCNK18Q7Z418 384 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 DAW1Q8N136 415 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 EFCAB3Q8N7B9 438 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 FEM1CQ96JP0 617 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 DCBLD2Q96PD2 775 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 APEX2Q9UBZ4 518 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 STAP2Q9UGK3 403 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 INVSQ9Y283 1065 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 MYOM2P54296 1465 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 RPAP1Q9BWH6 1393 aaPredicted RBP11.21□□□□□ -0.61
MSH6-201ENST00000234420 METTL18O95568 372 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 ANXA6P08133 673 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 SRGNP10124 158 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 ANPEPP15144 967 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 INO80DQ53TQ3 878 aaPredicted RBP11.21□□□□□ -0.61
MSH6-201ENST00000234420 AADACL4Q5VUY2 407 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 DENND1CQ8IV53 801 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 KIAA1683Q9H0B3 1180 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 ATG10Q9H0Y0 220 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 A0A087WZ62 844 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 SSU72P8A0A1W2PR75 194 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 RGS10O43665 173 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 USP11P51784 963 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 FSCN1Q16658 493 aaKnown RBP11.21□□□□□ -0.62
MSH6-201ENST00000234420 GFOD2Q3B7J2 385 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 OGFRL1Q5TC84 451 aaPredicted RBP11.21□□□□□ -0.62
MSH6-201ENST00000234420 CXCL17Q6UXB2 119 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 STRA8Q7Z7C7 330 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 LGI2Q8N0V4 545 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 AP3S1Q92572 193 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 TRIM43Q96BQ3 446 aaPredicted RBP11.21□□□□□ -0.62
MSH6-201ENST00000234420 GMPPBQ9Y5P6 360 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 CPED1A4D0V7 1026 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 ISM1B1AKI9 464 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 ERVV-1B6SEH8 477 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 SLCO1B7G3V0H7 640 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 MRASO14807 208 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 C9P02748 559 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 THRBP10828 461 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 ITIH1P19827 911 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 IGFALSP35858 605 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 PPP2R2BQ00005 443 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 ITGA9Q13797 1035 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 C16orf46Q6P387 395 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 GUF1Q8N442 669 aaKnown RBP11.21□□□□□ -0.62
MSH6-201ENST00000234420 Q8N9G6 341 aaPredicted RBP11.21□□□□□ -0.62
MSH6-201ENST00000234420 CD99L2Q8TCZ2 262 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 TRNT1Q96Q11 434 aaKnown RBP11.21□□□□□ -0.62
MSH6-201ENST00000234420 RNF121Q9H920 327 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 GPN1Q9HCN4 374 aaPredicted RBP11.21□□□□□ -0.62
MSH6-201ENST00000234420 EIF3KQ9UBQ5 218 aaKnown RBP11.21□□□□□ -0.62
MSH6-201ENST00000234420 SSR3Q9UNL2 185 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 NAALADL1Q9UQQ1 740 aa11.21□□□□□ -0.62
MSH6-201ENST00000234420 MYBL2P10244 700 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 UCHL3P15374 230 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 MAPK1P28482 360 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 GRIA3P42263 894 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 POLD2P49005 469 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 PTPN5P54829 565 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 DLG1Q12959 904 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 BMPR2Q13873 1038 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 TNFAIP8L3Q5GJ75 292 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 RBM43Q6ZSC3 357 aaKnown RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 PCDH20Q8N6Y1 951 aaKnown RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 ZNF563Q8TA94 476 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 ABHD5Q8WTS1 349 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms