RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 MRM3Q9HC36 420 aaKnown RBP17.02■□□□□ 0.32
TVP23C-201ENST00000225576 CCL26Q9Y258 94 aa17.02■□□□□ 0.32
TVP23C-201ENST00000225576 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.01■□□□□ 0.31
TVP23C-201ENST00000225576 ZCWPW2A0A1B0GU75 182 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 LOC285095A0A1B0GVY8 99 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 CYBBP04839 570 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 CHN1P15882 459 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 MZF1P28698 734 aaPredicted RBP17.01■□□□□ 0.31
TVP23C-201ENST00000225576 SERPINB9P50453 376 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 SLC18A1P54219 525 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 ARF5P84085 180 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 MGAT5Q09328 741 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 IHHQ14623 411 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 CYTH1Q15438 398 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 INO80DQ53TQ3 878 aaPredicted RBP17.01■□□□□ 0.31
TVP23C-201ENST00000225576 FYB2Q5VWT5 728 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 DCAF4L2Q8NA75 395 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 FIBINQ8TAL6 211 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 MDM1Q8TC05 714 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 ZNF669Q96BR6 464 aaPredicted RBP17.01■□□□□ 0.31
TVP23C-201ENST00000225576 CERS2Q96G23 380 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 CDCA3Q99618 268 aaPredicted RBP17.01■□□□□ 0.31
TVP23C-201ENST00000225576 PIDD1Q9HB75 910 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 SSU72Q9NP77 194 aaKnown RBP17.01■□□□□ 0.31
TVP23C-201ENST00000225576 CHRAC1Q9NRG0 131 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 VPS28Q9UK41 221 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 CEP290O15078 2479 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 TMEM120BA0PK00 339 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 SRRM3A6NNA2 597 aaPredicted RBP17.01■□□□□ 0.31
TVP23C-201ENST00000225576 FAM155BO75949 473 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 KRT37O76014 449 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 SERPINF2P08697 491 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 SNRPAP09012 282 aaKnown RBP17.01■□□□□ 0.31
TVP23C-201ENST00000225576 CR2P20023 1033 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 CSKP41240 450 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 NRIP1P48552 1158 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 KCNC3Q14003 757 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 SLC1A5Q15758 541 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 PCSK7Q16549 785 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 CES3Q6UWW8 571 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 TPGS1Q6ZTW0 290 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 UNC5BQ8IZJ1 945 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 WFDC5Q8TCV5 224 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 SMG7Q92540 1137 aaKnown RBP17.01■□□□□ 0.31
TVP23C-201ENST00000225576 MFSD3Q96ES6 412 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 FEM1CQ96JP0 617 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 SMC6Q96SB8 1091 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 SLC28A3Q9HAS3 691 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 KIAA1522Q9P206 1035 aaPredicted RBP17.01■□□□□ 0.31
TVP23C-201ENST00000225576 TBC1D14Q9P2M4 693 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 MRPS23Q9Y3D9 190 aaKnown RBP17.01■□□□□ 0.31
TVP23C-201ENST00000225576 ACTL7AQ9Y615 435 aa17.01■□□□□ 0.31
TVP23C-201ENST00000225576 A0A1W2PPM1 405 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 PRPF4O43172 522 aaKnown RBP eCLIP17■□□□□ 0.314e-8■■■□□ 14.7
TVP23C-201ENST00000225576 SNAP91O60641 907 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 KRT38O76015 456 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 CD160O95971 181 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 ADRA1DP25100 572 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 CNTFP26441 200 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 WEE1P30291 646 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 LSP1P33241 339 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 USP4Q13107 963 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 ZNF77Q15935 545 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 TTC19Q6DKK2 380 aaPredicted RBP17■□□□□ 0.31
TVP23C-201ENST00000225576 KIAA1958Q8N8K9 716 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 PPHLN1Q8NEY8 458 aaKnown RBP17■□□□□ 0.31
TVP23C-201ENST00000225576 RIN3Q8TB24 985 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 GDPD5Q8WTR4 605 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 ACDQ96AP0 544 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 ALKBH8Q96BT7 664 aaKnown RBP17■□□□□ 0.31
TVP23C-201ENST00000225576 MTBPQ96DY7 904 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 ZSWIM3Q96MP5 696 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 RANBP9Q96S59 729 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 C2orf49Q9BVC5 232 aaPredicted RBP17■□□□□ 0.31
TVP23C-201ENST00000225576 SFXN1Q9H9B4 322 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 KCNK9Q9NPC2 374 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 PPANQ9NQ55 473 aaKnown RBP17■□□□□ 0.31
TVP23C-201ENST00000225576 INTS9Q9NV88 658 aaKnown RBP17■□□□□ 0.31
TVP23C-201ENST00000225576 PRKAG3Q9UGI9 489 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 SMG5Q9UPR3 1016 aaKnown RBP17■□□□□ 0.31
TVP23C-201ENST00000225576 TCAF1Q9Y4C2 921 aa17■□□□□ 0.31
TVP23C-201ENST00000225576 CXorf51AA0A1B0GTR3 108 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 TTC24A2A3L6 582 aaPredicted RBP16.99■□□□□ 0.31
TVP23C-201ENST00000225576 PRAMEF12O95522 483 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 MT-ND3P03897 115 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 CEBPBP17676 345 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 HLA-DPA1P20036 260 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 NMBRP28336 390 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 CHRNA4P43681 627 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 NUMBP49757 651 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 SERPINH1P50454 418 aaKnown RBP16.99■□□□□ 0.31
TVP23C-201ENST00000225576 PLK1P53350 603 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 CDK18Q07002 472 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 NSUN2Q08J23 767 aaKnown RBP eCLIP16.99■□□□□ 0.31
TVP23C-201ENST00000225576 MSLNQ13421 630 aaPredicted RBP16.99■□□□□ 0.31
TVP23C-201ENST00000225576 SLC12A1Q13621 1099 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 KDELC2Q7Z4H8 507 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 SLC25A41Q8N5S1 370 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 OTUB2Q96DC9 234 aa16.99■□□□□ 0.31
TVP23C-201ENST00000225576 NUDCD1Q96RS6 583 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms