RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 RD3Q7Z3Z2 195 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 PCDH20Q8N6Y1 951 aaKnown RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 UTP15Q8TED0 518 aaKnown RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 CPXM1Q96SM3 734 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 FTHL17Q9BXU8 183 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 B3GNT5Q9BYG0 378 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 EPS8L2Q9H6S3 715 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 SPG21Q9NZD8 308 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 MORF4L1Q9UBU8 362 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 RGS14O43566 566 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 ITGA2BP08514 1039 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 PHKG1Q16816 387 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 PTPRNQ16849 979 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 DCLRE1AQ6PJP8 1040 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 TOP6BLQ8N6T0 577 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 PTGR2Q8N8N7 351 aaPredicted RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 DDHD1Q8NEL9 900 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 PPTC7Q8NI37 304 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 BSNDQ8WZ55 320 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 BORCS6Q96GS4 357 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 ZC4H2Q9NQZ6 224 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 KLQ9UEF7 1012 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 VPS51Q9UID3 782 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 SH3BGRLO75368 114 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 POLR2EP19388 210 aaKnown RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 BRCC3P46736 316 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 RPS7P62081 194 aaKnown RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 KCTD19Q17RG1 926 aaPredicted RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 FBXL19Q6PCT2 694 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 LCLAT1Q6UWP7 414 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 SLC41A1Q8IVJ1 513 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 P2RY11Q96G91 374 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 FCRL2Q96LA5 508 aaPredicted RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 MRPL45Q9BRJ2 306 aaKnown RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 EFR3BQ9Y2G0 817 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 BCORQ6W2J9 1755 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 HDAC3O15379 428 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 ADCY6O43306 1168 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 DYRK3O43781 588 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 ANXA5P08758 320 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 PIRTP0C851 137 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 ADRA1BP35368 520 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 MAXP61244 160 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 PRKCQQ04759 706 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 TRIM16LQ309B1 348 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 SETMARQ53H47 684 aaPredicted RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 SDHAF4Q5VUM1 108 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 ZNF621Q6ZSS3 439 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 ARCQ7LC44 396 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 STRADAQ7RTN6 431 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 MON1AQ86VX9 555 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 TRAPPC5Q8IUR0 188 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 ZSCAN18Q8TBC5 510 aaPredicted RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 ZNF398Q8TD17 642 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 CRYGNQ8WXF5 182 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 GLMNQ92990 594 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 CCDC3Q9BQI4 270 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 SLC27A5Q9Y2P5 690 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 TDRKHQ9Y2W6 561 aaKnown RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 MAST2Q6P0Q8 1798 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 SMIM28A0A1B0GU29 152 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 TCRBV7S2A1N4TA0A589 114 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 TLR5O60602 858 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 ERBB2P04626 1255 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 LRPAP1P30533 357 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 MAPK8P45983 427 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 NEK3P51956 506 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 CCL23P55773 120 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 SNRPD1P62314 119 aaKnown RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 MRPS22P82650 360 aaKnown RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 XRCC4Q13426 336 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 TUSC3Q13454 348 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 CYP1B1Q16678 543 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 QPCTQ16769 361 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 SLC25A52Q3SY17 297 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 FAM45BPQ6NSW5 357 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 RGMBQ6NW40 437 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 TRABD2AQ86V40 505 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 EID3Q8N140 333 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 MTMR14Q8NCE2 650 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 SELENOMQ8WWX9 145 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 PIK3R5Q8WYR1 880 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 NMD3Q96D46 503 aaKnown RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 NTPCRQ9BSD7 190 aaKnown RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 NFKBIZQ9BYH8 718 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.63□□□□□ -0.55
NOD1-201ENST00000222823 DHX33Q9H6R0 707 aaKnown RBP11.63□□□□□ -0.55
NOD1-201ENST00000222823 C15orf41Q9Y2V0 281 aa11.63□□□□□ -0.55
NOD1-201ENST00000222823 ONECUT3O60422 494 aaPredicted RBP11.62□□□□□ -0.55
NOD1-201ENST00000222823 AVILO75366 819 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 SMAD3P84022 425 aaKnown RBP11.62□□□□□ -0.55
NOD1-201ENST00000222823 GRIK3Q13003 919 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 CTBP1Q13363 440 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 C9orf57Q5W0N0 161 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 POTEHQ6S545 545 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 DENND1CQ8IV53 801 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 NETO2Q8NC67 525 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 FAM45AQ8TCE6 357 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 SUSD6Q92537 303 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 MAGED4Q96JG8 741 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms