RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 EML3Q32P44 896 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 FGD3Q5JSP0 725 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 KRT78Q8N1N4 520 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 PDCD10Q9BUL8 212 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 FICDQ9BVA6 458 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 GSDMCQ9BYG8 508 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 CEP41Q9BYV8 373 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 UBP1Q9NZI7 540 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 F5H5T6 163 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 M0QYT0 321 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 RNF225M0QZC1 329 aaPredicted RBP10.55□□□□□ -0.72
VCL-201ENST00000211998 DDX3YO15523 660 aaKnown RBP10.55□□□□□ -0.72
VCL-201ENST00000211998 MTRF1O75570 445 aaKnown RBP10.55□□□□□ -0.72
VCL-201ENST00000211998 MED22Q15528 200 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 OOSP2Q86WS3 158 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 KATNAL2Q8IYT4 538 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 TMEM132CQ8N3T6 1108 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 EPB41L4BQ9H329 900 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 DDIT4Q9NX09 232 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 ABI2Q9NYB9 513 aaPredicted RBP10.55□□□□□ -0.72
VCL-201ENST00000211998 ERGIC3Q9Y282 383 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 NRXN1Q9ULB1 1477 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 SALL3Q9BXA9 1300 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 NRP2O60462 931 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 H6PDO95479 791 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 GLRA2P23416 452 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 CYP2F1P24903 491 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 THPOP40225 353 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 GRIA4P48058 902 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 GNA12Q03113 381 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 EARS2Q5JPH6 523 aaKnown RBP10.55□□□□□ -0.72
VCL-201ENST00000211998 THAP5Q7Z6K1 395 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 TBC1D21Q8IYX1 336 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 ABRAQ8N0Z2 381 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 REXO5Q96IC2 774 aaKnown RBP10.55□□□□□ -0.72
VCL-201ENST00000211998 ACSS3Q9H6R3 686 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 ADARB2Q9NS39 739 aaKnown RBP10.55□□□□□ -0.72
VCL-201ENST00000211998 CLN6Q9NWW5 311 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 SSR3Q9UNL2 185 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 PLCL2Q9UPR0 1127 aa10.55□□□□□ -0.72
VCL-201ENST00000211998 CRTAMO95727 393 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 LSM8O95777 96 aaKnown RBP10.54□□□□□ -0.72
VCL-201ENST00000211998 ERVK-10P10266 1014 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 CYP4B1P13584 511 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 ITIH1P19827 911 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 SLC7A2P52569 658 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 BCAT1P54687 386 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 KLF10Q13118 480 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 PCSK9Q8NBP7 692 aaKnown RBP10.54□□□□□ -0.72
VCL-201ENST00000211998 NFKBIL1Q9UBC1 381 aaPredicted RBP10.54□□□□□ -0.72
VCL-201ENST00000211998 PPRC1Q5VV67 1664 aaKnown RBP10.54□□□□□ -0.72
VCL-201ENST00000211998 TBX1O43435 398 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 AVILO75366 819 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 KCNH1O95259 989 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 LBPP18428 481 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 PRKCIP41743 596 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 ACADVLP49748 655 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 CCNG1P51959 295 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 MAD2L1Q13257 205 aaPredicted RBP10.54□□□□□ -0.72
VCL-201ENST00000211998 PRAMEF18Q5VWM3 479 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 APBA2Q99767 749 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 CYP3A43Q9HB55 503 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 PCDH18Q9HCL0 1135 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 AP4E1Q9UPM8 1137 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 FAM237AA0A1B0GTK4 181 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 MGAT4DA6NG13 374 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 G3V2T6 193 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 BOLA2-SMG1P6H3BVE0 249 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 LIASO43766 372 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 LTFP02788 710 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 PAICSP22234 425 aaKnown RBP10.54□□□□□ -0.72
VCL-201ENST00000211998 BNIP3Q12983 259 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 TSC22D1Q15714 1073 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 TNFAIP8L3Q5GJ75 292 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 KHDRBS2Q5VWX1 349 aaKnown RBP10.54□□□□□ -0.72
VCL-201ENST00000211998 MACC1Q6ZN28 852 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 OFCC1Q8IZS5 231 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 FBXO39Q8N4B4 442 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 LSM14AQ8ND56 463 aaKnown RBP10.54□□□□□ -0.72
VCL-201ENST00000211998 SLC35C1Q96A29 364 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 EMILIN2Q9BXX0 1053 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 CDH19Q9H159 772 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 MED28Q9H204 178 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 TMX2Q9Y320 296 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 RAP2CQ9Y3L5 183 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 H0Y858 1186 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 H3BMM5 538 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 PLA2G6O60733 806 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 CYP7B1O75881 506 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 PBX1P40424 430 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 ABCG1P45844 678 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 GABRB2P47870 512 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 SLC9A3P48764 834 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 POU6F1Q14863 301 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 PMF1Q6P1K2 205 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 CHMP1BQ7LBR1 199 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 PROSER1Q86XN7 944 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 WDR49Q8IV35 697 aa10.54□□□□□ -0.72
VCL-201ENST00000211998 C10orf107Q8IVU9 208 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms