RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 PTPRMP28827 1452 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 NUAK1O60285 661 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 SLC6A2P23975 617 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 GTF2A2P52657 109 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 C10orf120Q5SQS8 335 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 MPP5Q8N3R9 675 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 TC2NQ8N9U0 490 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 FAM111AQ96PZ2 611 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 CHID1Q9BWS9 393 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 UNKLQ9H9P5 680 aaKnown RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 NMRK2Q9NPI5 230 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 CATSPERZQ9NTU4 200 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 GPN3Q9UHW5 284 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 RUVBL2Q9Y230 463 aaKnown RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 HEATR5BQ9P2D3 2071 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 RAMP2O60895 175 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 SEC24AO95486 1093 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 IFNA16P05015 189 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 TXNP10599 105 aaKnown RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ARID5BQ14865 1188 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 STYK1Q6J9G0 422 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 GAS2L3Q86XJ1 694 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 TEX47Q8TBZ9 253 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF670Q9BS34 389 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 APOL5Q9BWW9 433 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 AGPAT3Q9NRZ7 376 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 PCDHGB5Q9Y5G0 923 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 LAMB4A4D0S4 1761 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 SYNDIG1LA6NDD5 238 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 CATP04040 527 aaKnown RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 CLCN5P51795 746 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 CACNA2D1P54289 1103 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 MBTD1Q05BQ5 628 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 IFNEQ86WN2 208 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 FAM49BQ9NUQ9 324 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 DPP3Q9NY33 737 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 CALML5Q9NZT1 146 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ZNRF3Q9ULT6 936 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 EDARQ9UNE0 448 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 USP20Q9Y2K6 914 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 SMCO3A2RU48 225 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 INPP4BO15327 924 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ASLP04424 464 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 GPIP06744 558 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 KELP23276 732 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 LRPAP1P30533 357 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 UGT2B15P54855 530 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 S100A12P80511 92 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 KCNMA1Q12791 1236 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 TAF8Q7Z7C8 310 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF467Q7Z7K2 595 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ADGRG6Q86SQ4 1221 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 KCTD15Q96SI1 283 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 RUSC1Q9BVN2 902 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 SSU72Q9NP77 194 aaKnown RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 PAK6Q9NQU5 681 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 DDIT4Q9NX09 232 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 SPATA31A6Q5VVP1 1343 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF407Q9C0G0 2248 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 TRIM43BA6NCK2 446 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 ORC5O43913 435 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 BNIP3LO60238 219 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 PROSCO94903 275 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 SERPIND1P05546 499 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 URODP06132 367 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 CD2P06729 351 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 NUDT17P0C025 328 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 PLEKHN1Q494U1 663 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 FBXW10Q5XX13 1052 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 FAM83AQ86UY5 434 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 FAM228AQ86W67 206 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 LDHDQ86WU2 507 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 SCAIQ8N9R8 606 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 FAM71DQ8N9W8 422 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 POC5Q8NA72 575 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 MTRRQ9UBK8 725 aa6.14□□□□□ -1.43
VPS13D-201ENST00000011700 DDX20Q9UHI6 824 aaKnown RBP6.14□□□□□ -1.43
VPS13D-201ENST00000011700 EPB42P16452 691 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 GK3PQ14409 553 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 TAF13Q15543 124 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 MAPKAPK3Q16644 382 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ACE2Q9BYF1 805 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 AP3D1O14617 1153 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 CABYRO75952 493 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 MAPK3P27361 379 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 FEN1P39748 380 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 LAPTM5Q13571 262 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PLEKHG6Q3KR16 790 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 HIPK1Q86Z02 1210 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 TOP1MTQ969P6 601 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 FUT8Q9BYC5 575 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 TDRKHQ9Y2W6 561 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ESYT3A0FGR9 886 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 C17orf102A2RUQ5 167 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ENO2P09104 434 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PTSQ03393 145 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 UBE3AQ05086 875 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 SGCGQ13326 291 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 UNC93AQ86WB7 457 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 TIGD4Q8IY51 512 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms