RNA–Protein interactions for RNA: ENST00000642141.1

SCN1A-222, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

Gene SCN1A, Length 921 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-222ENST00000642141 MON1BQ7L1V2 547 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 STRADAQ7RTN6 431 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 IRF2BP2Q7Z5L9 587 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 SLFN11Q7Z7L1 901 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 NLRP14Q86W24 1093 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 TRIM69Q86WT6 500 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 C3orf20Q8ND61 904 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 SAP25Q8TEE9 199 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 ARHGEF2Q92974 986 aaKnown RBP10.49□□□□□ -0.73
SCN1A-222ENST00000642141 FAM131CQ96AQ9 280 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 TBC1D31Q96DN5 1066 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 CNDP2Q96KP4 475 aaKnown RBP10.49□□□□□ -0.73
SCN1A-222ENST00000642141 HEPHQ9BQS7 1158 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 CALN1Q9BXU9 219 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 NAT10Q9H0A0 1025 aaKnown RBP10.49□□□□□ -0.73
SCN1A-222ENST00000642141 KLC2Q9H0B6 622 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 KDM4CQ9H3R0 1056 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 PREBQ9HCU5 417 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 GPATCH2LQ9NWQ4 482 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 HPCAL4Q9UM19 191 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 ZFR2Q9UPR6 939 aaKnown RBP10.49□□□□□ -0.73
SCN1A-222ENST00000642141 WASF2Q9Y6W5 498 aa10.49□□□□□ -0.73
SCN1A-222ENST00000642141 DSPP15924 2871 aaKnown RBP10.48□□□□□ -0.73
SCN1A-222ENST00000642141 FAM221BA6H8Z2 402 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 ANKRD62A6NC57 917 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 ENC1O14682 589 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 BUB1O43683 1085 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 RAMP2O60895 175 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 PAK4O96013 591 aaPredicted RBP10.48□□□□□ -0.73
SCN1A-222ENST00000642141 THEGLP0DJG4 465 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 FERP16591 822 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 EPHB2P29323 1055 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 CLCN6P51797 869 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 ZNF143P52747 638 aaPredicted RBP10.48□□□□□ -0.73
SCN1A-222ENST00000642141 SLC20A2Q08357 652 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 INAVAQ3KP66 663 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 ACBD5Q5T8D3 534 aaPredicted RBP10.48□□□□□ -0.73
SCN1A-222ENST00000642141 ACAD10Q6JQN1 1059 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 ZNF783Q6ZMS7 281 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 HORMAD1Q86X24 394 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 MCOLN2Q8IZK6 566 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 PCDH20Q8N6Y1 951 aaKnown RBP10.48□□□□□ -0.73
SCN1A-222ENST00000642141 OR13H1Q8NG92 308 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 MDM1Q8TC05 714 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 KLHDC7BQ96G42 594 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 NAP1L5Q96NT1 182 aaPredicted RBP10.48□□□□□ -0.73
SCN1A-222ENST00000642141 HDAC8Q9BY41 377 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 RTN4Q9NQC3 1192 aaKnown RBP10.48□□□□□ -0.73
SCN1A-222ENST00000642141 TMEM248Q9NWD8 314 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 GGT7Q9UJ14 662 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 NEU3Q9UQ49 428 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 DMTF1Q9Y222 760 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 ITM2BQ9Y287 266 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 NBEAQ8NFP9 2946 aa10.48□□□□□ -0.73
SCN1A-222ENST00000642141 NYNRINQ9P2P1 1898 aaKnown RBP10.48□□□□□ -0.73
SCN1A-222ENST00000642141 DOCK9Q9BZ29 2069 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 TCRBV5S1A1TA0A578 114 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 TMEM8BA6NDV4 472 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 IGLON5A6NGN9 336 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 LRRC53A6NM62 1247 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 NEMP1O14524 444 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 RAD51BO15315 384 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 FFAR2O15552 330 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 UGT2B4P06133 528 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 SKILP12757 684 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 MYF5P13349 255 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 ADRB3P13945 408 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 ITIH2P19823 946 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 EPHA8P29322 1005 aaPredicted RBP10.47□□□□□ -0.73
SCN1A-222ENST00000642141 AKT2P31751 481 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 L1CAMP32004 1257 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 MAPKAPK2P49137 400 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 FGL2Q14314 439 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 ASIC2Q16515 512 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 MYLK3Q32MK0 819 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 EFHC2Q5JST6 749 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 C19orf48Q6RUI8 117 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 Q6ZSR6 202 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 PARS2Q7L3T8 475 aaKnown RBP10.47□□□□□ -0.73
SCN1A-222ENST00000642141 TMPRSS7Q7RTY8 843 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 BAP1Q92560 729 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 HMCESQ96FZ2 354 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 PPP1R16AQ96I34 528 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 CNPY3Q9BT09 278 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 TRIM7Q9C029 511 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 CEP44Q9C0F1 390 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 MAGEH1Q9H213 219 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 NOL6Q9H6R4 1146 aaKnown RBP10.47□□□□□ -0.73
SCN1A-222ENST00000642141 TMEM51Q9NW97 253 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 UCKL1Q9NWZ5 548 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 PCSK1NQ9UHG2 260 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 FZD10Q9ULW2 581 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 DAAM1Q9Y4D1 1078 aa10.47□□□□□ -0.73
SCN1A-222ENST00000642141 CABIN1Q9Y6J0 2220 aa10.46□□□□□ -0.73
SCN1A-222ENST00000642141 CHD6Q8TD26 2715 aa10.46□□□□□ -0.73
SCN1A-222ENST00000642141 POM121BA6NF01 834 aa10.46□□□□□ -0.73
SCN1A-222ENST00000642141 TRABD2BA6NFA1 517 aa10.46□□□□□ -0.73
SCN1A-222ENST00000642141 C16orf96A6NNT2 1141 aa10.46□□□□□ -0.73
SCN1A-222ENST00000642141 SMTNL1A8MU46 457 aa10.46□□□□□ -0.73
SCN1A-222ENST00000642141 TRIM38O00635 465 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms