RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 TARSP26639 723 aaKnown RBP12.51□□□□□ -0.41
LINC00339-213ENST00000642137 NTSR1P30989 418 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 ACTN2P35609 894 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 IL12RB1P42701 662 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 PTGIRP43119 386 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 GDF10P55107 478 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 SEC13P55735 322 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 RHOAP61586 193 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 SNRPD1P62314 119 aaKnown RBP12.51□□□□□ -0.41
LINC00339-213ENST00000642137 C2orf54Q08AI8 447 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 DHX34Q14147 1143 aaKnown RBP12.51□□□□□ -0.41
LINC00339-213ENST00000642137 UBXN2BQ14CS0 331 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 HNRNPA1L2Q32P51 320 aaKnown RBP12.51□□□□□ -0.41
LINC00339-213ENST00000642137 C2orf27AQ580R0 203 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 CARD16Q5EG05 197 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 RALGPS1Q5JS13 557 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 SYDE1Q6ZW31 735 aaPredicted RBP12.51□□□□□ -0.41
LINC00339-213ENST00000642137 MAATS1Q7Z4T9 603 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 ZNF567Q8N184 647 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 PGBD5Q8N414 524 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 TSEN2Q8NCE0 465 aaKnown RBP12.51□□□□□ -0.41
LINC00339-213ENST00000642137 PTPRN2Q92932 1015 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 CCDC114Q96M63 670 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 SPATA13Q96N96 652 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 AGAP3Q96P47 875 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 ACOX2Q99424 681 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 KRT12Q99456 494 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 GABRG3Q99928 467 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 MGME1Q9BQP7 344 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 CARD6Q9BX69 1037 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 TBC1D17Q9HA65 648 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 NT5MQ9NPB1 228 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 PAK5Q9P286 719 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 KLHL8Q9P2G9 620 aaPredicted RBP12.51□□□□□ -0.41
LINC00339-213ENST00000642137 LHX3Q9UBR4 397 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 NEU2Q9Y3R4 380 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 MTF2Q9Y483 593 aaPredicted RBP12.51□□□□□ -0.41
LINC00339-213ENST00000642137 STON1Q9Y6Q2 735 aa12.51□□□□□ -0.41
LINC00339-213ENST00000642137 EDDM13A0A1B0GTR0 161 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 CHURC1-FNTBB4DL54 471 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 WASH3PC4AMC7 463 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 STK25O00506 426 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 OPHN1O60890 802 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 ATG13O75143 517 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 RNF40O75150 1001 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 ECEL1O95672 775 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 POP4O95707 220 aaKnown RBP12.5□□□□□ -0.41
LINC00339-213ENST00000642137 GAS8O95995 478 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 IFNB1P01574 187 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 KRT14P02533 472 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 HLA-DQB2P05538 268 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 CR2P20023 1033 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 CD68P34810 354 aaPredicted RBP12.5□□□□□ -0.41
LINC00339-213ENST00000642137 ITKQ08881 620 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 PARP6Q2NL67 630 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 ALG1LQ6GMV1 187 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 ITPRIPL1Q6GPH6 555 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 C22orf39Q6P5X5 142 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 SERPINA13PQ6UXR4 307 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 TRIM67Q6ZTA4 783 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 SRLQ86TD4 932 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 CHPFQ8IZ52 775 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 CCDC89Q8N998 374 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 IL17RCQ8NAC3 791 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 OR2AP1Q8NGE2 309 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 CCDC110Q8TBZ0 833 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 CLDN23Q96B33 292 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 FCRL5Q96RD9 977 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 NUDCD1Q96RS6 583 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 CPEB1Q9BZB8 566 aaKnown RBP12.5□□□□□ -0.41
LINC00339-213ENST00000642137 POLR1EQ9GZS1 481 aaKnown RBP12.5□□□□□ -0.41
LINC00339-213ENST00000642137 SLC25A51Q9H1U9 297 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 GLOD4Q9HC38 313 aa12.5□□□□□ -0.41
LINC00339-213ENST00000642137 FARP1Q9Y4F1 1045 aaPredicted RBP12.5□□□□□ -0.41
LINC00339-213ENST00000642137 COL6A3P12111 3177 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 MUC22E2RYF6 1773 aaPredicted RBP12.49□□□□□ -0.41
LINC00339-213ENST00000642137 FAM187AA6NFU0 413 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 MUSKO15146 869 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 KLF8O95600 359 aaPredicted RBP12.49□□□□□ -0.41
LINC00339-213ENST00000642137 IGSF6O95976 241 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 EPHX1P07099 455 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 HLA-EP13747 358 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 ETS1P14921 441 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 RPL22P35268 128 aaKnown RBP12.49□□□□□ -0.41
LINC00339-213ENST00000642137 FDFT1P37268 417 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 RECQLP46063 649 aaPredicted RBP12.49□□□□□ -0.41
LINC00339-213ENST00000642137 RPS9P46781 194 aaKnown RBP12.49□□□□□ -0.41
LINC00339-213ENST00000642137 SCNN1BP51168 640 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 NRLP54845 237 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 DR1Q01658 176 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 RAD51Q06609 339 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 GRM3Q14832 879 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 MYLK3Q32MK0 819 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 GLE1Q53GS7 698 aaKnown RBP12.49□□□□□ -0.41
LINC00339-213ENST00000642137 EOGTQ5NDL2 527 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 C9orf64Q5T6V5 341 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 ARHGEF18Q6ZSZ5 1173 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 GLIS1Q8NBF1 620 aa12.49□□□□□ -0.41
LINC00339-213ENST00000642137 TXNDC5Q8NBS9 432 aaKnown RBP12.49□□□□□ -0.41
LINC00339-213ENST00000642137 PJA1Q8NG27 643 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms