RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SNX24Q9Y343 169 aa17.76■□□□□ 0.43
PHGDH-230ENST00000641927 TCF20Q9UGU0 1960 aaKnown RBP17.75■□□□□ 0.43
PHGDH-230ENST00000641927 ESYT3A0FGR9 886 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 E7EVH7 732 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 MUSKO15146 869 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 METTL18O95568 372 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 SRPRAP08240 638 aaKnown RBP17.75■□□□□ 0.43
PHGDH-230ENST00000641927 GLULP15104 373 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 CD68P34810 354 aaPredicted RBP17.75■□□□□ 0.43
PHGDH-230ENST00000641927 GRSF1Q12849 480 aaKnown RBP eCLIP17.75■□□□□ 0.43
PHGDH-230ENST00000641927 PTPRNQ16849 979 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 FNDC3BQ53EP0 1204 aaKnown RBP17.75■□□□□ 0.43
PHGDH-230ENST00000641927 SYCP2LQ5T4T6 812 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 C4orf22Q6V702 233 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 PGBD5Q8N414 524 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 TM6SF2Q9BZW4 377 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 TNKS2Q9H2K2 1166 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 GLOD4Q9HC38 313 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 FBXL21Q9UKT6 434 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 ATP8A1Q9Y2Q0 1164 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 COL4A2P08572 1712 aa17.75■□□□□ 0.43
PHGDH-230ENST00000641927 CXorf51AA0A1B0GTR3 108 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 TTC24A2A3L6 582 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-230ENST00000641927 CD72P21854 359 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 LMAN1P49257 510 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 SCNN1BP51168 640 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 SEC13P55735 322 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 PRPSAP1Q14558 356 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 DLG2Q15700 870 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 PARP6Q2NL67 630 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 RYBPQ8N488 228 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-230ENST00000641927 FAM3CQ92520 227 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 MSANTD3Q96H12 275 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 SNF8Q96H20 258 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 MRGPRX3Q96LB0 322 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 SEMA3CQ99985 751 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 ETNK1Q9HBU6 452 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 ZDHHC4Q9NPG8 344 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 UBP1Q9NZI7 540 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 HSPA9P38646 679 aaKnown RBP17.74■□□□□ 0.43
PHGDH-230ENST00000641927 TNFRSF4P43489 277 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 RPL21P46778 160 aaKnown RBP17.74■□□□□ 0.43
PHGDH-230ENST00000641927 DSC2Q02487 901 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 CALCOCO2Q13137 446 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 MLF2Q15773 248 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-230ENST00000641927 TMEM196Q5HYL7 178 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 ATXN7L2Q5T6C5 722 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-230ENST00000641927 IZUMO3Q5VZ72 239 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 DUPD1Q68J44 220 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 C22orf39Q6P5X5 142 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 SERPINA13PQ6UXR4 307 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 GJD3Q8N144 294 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 MGME1Q9BQP7 344 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 SCUBE2Q9NQ36 999 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 LHX3Q9UBR4 397 aa17.74■□□□□ 0.43
PHGDH-230ENST00000641927 TTC34A8MYJ7 566 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 GJB3O75712 270 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 EGFP01133 1207 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 APRTP07741 180 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 DRD1P21728 446 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 FDFT1P37268 417 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 RGRP47804 291 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 ZNF234Q14588 700 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 TRADDQ15628 312 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 DGKKQ5KSL6 1271 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 EMC10Q5UCC4 262 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 EGFLAMQ63HQ2 1017 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 IFT20Q8IY31 132 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 ZNF366Q8N895 744 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 SPATA22Q8NHS9 363 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 IFT81Q8WYA0 676 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 FCRL5Q96RD9 977 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 RBM15Q96T37 977 aaKnown RBP eCLIP17.73■□□□□ 0.43
PHGDH-230ENST00000641927 CEP44Q9C0F1 390 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 SLC25A51Q9H1U9 297 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 ARHGEF3Q9NR81 526 aa17.73■□□□□ 0.43
PHGDH-230ENST00000641927 TPX2Q9ULW0 747 aaKnown RBP17.73■□□□□ 0.43
PHGDH-230ENST00000641927 NDRG2Q9UN36 371 aaKnown RBP17.73■□□□□ 0.43
PHGDH-230ENST00000641927 ANTXRLA6NF34 631 aa17.72■□□□□ 0.43
PHGDH-230ENST00000641927 K7EQS6 105 aa17.72■□□□□ 0.43
PHGDH-230ENST00000641927 ATP9BO43861 1147 aa17.72■□□□□ 0.43
PHGDH-230ENST00000641927 IGSF6O95976 241 aa17.72■□□□□ 0.43
PHGDH-230ENST00000641927 TIE1P35590 1138 aa17.72■□□□□ 0.43
PHGDH-230ENST00000641927 CD86P42081 329 aa17.72■□□□□ 0.43
PHGDH-230ENST00000641927 RECQLP46063 649 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-230ENST00000641927 NAA30Q147X3 362 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-230ENST00000641927 FSTL4Q6MZW2 842 aa17.72■□□□□ 0.43
PHGDH-230ENST00000641927 Q6ZVU0 165 aa17.72■□□□□ 0.43
PHGDH-230ENST00000641927 ZNF513Q8N8E2 541 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-230ENST00000641927 MYRIPQ8NFW9 859 aa17.72■□□□□ 0.43
PHGDH-230ENST00000641927 OR6K2Q8NGY2 324 aa17.72■□□□□ 0.43
PHGDH-230ENST00000641927 EZH1Q92800 747 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-230ENST00000641927 ISG20Q96AZ6 181 aaKnown RBP17.72■□□□□ 0.43
PHGDH-230ENST00000641927 GDAP1L1Q96MZ0 367 aa17.72■□□□□ 0.43
PHGDH-230ENST00000641927 ANKZF1Q9H8Y5 726 aa17.72■□□□□ 0.43
PHGDH-230ENST00000641927 MYO18AQ92614 2054 aaKnown RBP17.72■□□□□ 0.43
PHGDH-230ENST00000641927 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-230ENST00000641927 TARSL2A2RTX5 802 aaKnown RBP17.71■□□□□ 0.43
PHGDH-230ENST00000641927 GOLGA6CA6NDK9 693 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 GOLGA6BA6NDN3 693 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms