RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 DNAJC28Q9NX36 388 aa17.04■□□□□ 0.32
PHGDH-213ENST00000641272 CHMP5Q9NZZ3 219 aa17.04■□□□□ 0.32
PHGDH-213ENST00000641272 GGT7Q9UJ14 662 aa17.04■□□□□ 0.32
PHGDH-213ENST00000641272 NOCTQ9UK39 431 aaKnown RBP17.04■□□□□ 0.32
PHGDH-213ENST00000641272 CHD5Q8TDI0 1954 aa17.04■□□□□ 0.32
PHGDH-213ENST00000641272 A6NNZ2 444 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 RAD51BO15315 384 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 ERCC5P28715 1186 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-213ENST00000641272 TMEM259Q4ZIN3 620 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 TCP11X2Q5H9J9 407 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 LRRC73Q5JTD7 316 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 RETSATQ6NUM9 610 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 RWDD4Q6NW29 188 aaKnown RBP17.03■□□□□ 0.32
PHGDH-213ENST00000641272 PCDH20Q8N6Y1 951 aaKnown RBP17.03■□□□□ 0.32
PHGDH-213ENST00000641272 OR4C6Q8NH72 309 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 SLC30A5Q8TAD4 765 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 C1orf74Q96LT6 269 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 HAPLN3Q96S86 360 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 HDAC8Q9BY41 377 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 VPS16Q9H269 839 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 NLRC4Q9NPP4 1024 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 FAM207AQ9NSI2 230 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-213ENST00000641272 DNAI1Q9UI46 699 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 CLCA2Q9UQC9 943 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 PCDHB1Q9Y5F3 818 aa17.03■□□□□ 0.32
PHGDH-213ENST00000641272 EPHB6O15197 1021 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 BRINP1O60477 761 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 NEBLO76041 1014 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 CDK4P11802 303 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 ACP1P24666 158 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 ITGB7P26010 798 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 ABL2P42684 1182 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 POLR2FP61218 127 aaKnown RBP17.02■□□□□ 0.32
PHGDH-213ENST00000641272 FMO1Q01740 532 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 HS1BP3Q53T59 392 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 CARD16Q5EG05 197 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 Q6ZSR6 202 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 GPT2Q8TD30 523 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 RXFP2Q8WXD0 754 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 HEPHQ9BQS7 1158 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 STK33Q9BYT3 514 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 CEP44Q9C0F1 390 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 KLHL11Q9NVR0 708 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 NEU3Q9UQ49 428 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 FADS3Q9Y5Q0 445 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 KNTC1P50748 2209 aa17.02■□□□□ 0.32
PHGDH-213ENST00000641272 FASNP49327 2511 aaKnown RBP17.02■□□□□ 0.31
PHGDH-213ENST00000641272 POM121BA6NF01 834 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 FAM72CH0Y354 149 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 CD160O95971 181 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 GIMD1P0DJR0 217 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 CHRNB2P17787 502 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 SDC4P31431 198 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 CCDC15Q0P6D6 951 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 ZNF211Q13398 564 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-213ENST00000641272 ILKQ13418 452 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 TPRG1LQ5T0D9 272 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 FAM72AQ5TYM5 149 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 MANEALQ5VSG8 457 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 SMYD5Q6GMV2 418 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 FAM72DQ6L9T8 149 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 NEK5Q6P3R8 708 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 ZNF783Q6ZMS7 281 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 ABI3BPQ7Z7G0 1075 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 FAM72BQ86X60 149 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 CCDC185Q8N715 623 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 NETO2Q8NC67 525 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 SLC17A9Q9BYT1 436 aa17.01■□□□□ 0.31
PHGDH-213ENST00000641272 PAK4O96013 591 aaPredicted RBP17■□□□□ 0.31
PHGDH-213ENST00000641272 MT-CO3P00414 261 aa17■□□□□ 0.31
PHGDH-213ENST00000641272 UGT2B4P06133 528 aa17■□□□□ 0.31
PHGDH-213ENST00000641272 EEF1GP26641 437 aaKnown RBP17■□□□□ 0.31
PHGDH-213ENST00000641272 L1CAMP32004 1257 aa17■□□□□ 0.31
PHGDH-213ENST00000641272 CDR2Q01850 454 aa17■□□□□ 0.31
PHGDH-213ENST00000641272 KRT31Q15323 416 aa17■□□□□ 0.31
PHGDH-213ENST00000641272 CCDC14Q49A88 953 aa17■□□□□ 0.31
PHGDH-213ENST00000641272 ATXN7L2Q5T6C5 722 aaPredicted RBP17■□□□□ 0.31
PHGDH-213ENST00000641272 KIAA1161Q6NSJ0 714 aa17■□□□□ 0.31
PHGDH-213ENST00000641272 KYAT3Q6YP21 454 aaKnown RBP17■□□□□ 0.31
PHGDH-213ENST00000641272 LRRC69Q6ZNQ3 347 aa17■□□□□ 0.31
PHGDH-213ENST00000641272 ZNF354CQ86Y25 554 aa17■□□□□ 0.31
PHGDH-213ENST00000641272 APOLD1Q96LR9 279 aa17■□□□□ 0.31
PHGDH-213ENST00000641272 NRSN2Q9GZP1 204 aa17■□□□□ 0.31
PHGDH-213ENST00000641272 HECAQ9UBI9 543 aaPredicted RBP17■□□□□ 0.31
PHGDH-213ENST00000641272 PPARGC1AQ9UBK2 798 aaKnown RBP17■□□□□ 0.31
PHGDH-213ENST00000641272 OR12D3Q9UGF7 316 aa17■□□□□ 0.31
PHGDH-213ENST00000641272 COL27A1Q8IZC6 1860 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-213ENST00000641272 LY6G6EA0A0G2JKS1 128 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 EIF4E1BA6NMX2 242 aaKnown RBP16.99■□□□□ 0.31
PHGDH-213ENST00000641272 KRIT1O00522 736 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 NEMP1O14524 444 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 SPINT1O43278 529 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 LRIG2O94898 1065 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 CYP1A1P04798 512 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-213ENST00000641272 ALPPL2P10696 532 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 MMP8P22894 467 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 SOX5P35711 763 aa16.99■□□□□ 0.31
PHGDH-213ENST00000641272 EIF2S3P41091 472 aaKnown RBP16.99■□□□□ 0.31
PHGDH-213ENST00000641272 RPS21P63220 83 aaKnown RBP16.99■□□□□ 0.31
PHGDH-213ENST00000641272 CCDC173Q0VFZ6 552 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms