RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 RNASEH2AO75792 299 aaKnown RBP27.15■■□□□ 1.94
VEGFA-231ENST00000640499 PEX11BO96011 259 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 MAOBP27338 520 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 VAV2P52735 878 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 CSRP2Q16527 193 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 ATXN7L2Q5T6C5 722 aaPredicted RBP27.15■■□□□ 1.94
VEGFA-231ENST00000640499 NCBP2-AS2Q69YL0 99 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 CYP2U1Q7Z449 544 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 DSG4Q86SJ6 1040 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 KIAA2013Q8IYS2 634 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 OR6K2Q8NGY2 324 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 GANCQ8TET4 914 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 PIGKQ92643 395 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 CALN1Q9BXU9 219 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 SGK2Q9HBY8 427 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 IL36AQ9UHA7 158 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 IPO11Q9UI26 975 aaKnown RBP27.15■■□□□ 1.94
VEGFA-231ENST00000640499 FZD4Q9ULV1 537 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 LAMA1P25391 3075 aa27.15■■□□□ 1.94
VEGFA-231ENST00000640499 PATE3B3GLJ2 98 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 LEFTY1O75610 366 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 SEMA4FO95754 770 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 GSRP00390 522 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 ZNF806P0C7X5 589 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 CNTN1Q12860 1018 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 SF3A2Q15428 464 aaKnown RBP27.14■■□□□ 1.94
VEGFA-231ENST00000640499 TCEAL6Q6IPX3 200 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.14■■□□□ 1.94
VEGFA-231ENST00000640499 OR2AP1Q8NGE2 309 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 GRIN3AQ8TCU5 1115 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 CASKIN2Q8WXE0 1202 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 DNASE2BQ8WZ79 361 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 TCEAL3Q969E4 200 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 OMDQ99983 421 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 HEPHQ9BQS7 1158 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 LUC7LQ9NQ29 371 aaKnown RBP27.14■■□□□ 1.94
VEGFA-231ENST00000640499 UBA2Q9UBT2 640 aaPredicted RBP27.14■■□□□ 1.94
VEGFA-231ENST00000640499 NCKAP1Q9Y2A7 1128 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 SLCO1B1Q9Y6L6 691 aa27.14■■□□□ 1.94
VEGFA-231ENST00000640499 ATXN2Q99700 1313 aaKnown RBP27.14■■□□□ 1.93
VEGFA-231ENST00000640499 GSDMDP57764 484 aa27.13■■□□□ 1.93
VEGFA-231ENST00000640499 TAS2R38P59533 333 aa27.13■■□□□ 1.93
VEGFA-231ENST00000640499 IL10RBQ08334 325 aa27.13■■□□□ 1.93
VEGFA-231ENST00000640499 PAFAH1B3Q15102 231 aaKnown RBP27.13■■□□□ 1.93
VEGFA-231ENST00000640499 MYLK3Q32MK0 819 aa27.13■■□□□ 1.93
VEGFA-231ENST00000640499 AGBL4Q5VU57 503 aa27.13■■□□□ 1.93
VEGFA-231ENST00000640499 DCAF12L1Q5VU92 463 aa27.13■■□□□ 1.93
VEGFA-231ENST00000640499 FAM46CQ5VWP2 391 aa27.13■■□□□ 1.93
VEGFA-231ENST00000640499 CCDC114Q96M63 670 aa27.13■■□□□ 1.93
VEGFA-231ENST00000640499 ORAI3Q9BRQ5 295 aa27.13■■□□□ 1.93
VEGFA-231ENST00000640499 RXFP3Q9NSD7 469 aa27.13■■□□□ 1.93
VEGFA-231ENST00000640499 TRIM10Q9UDY6 481 aa27.13■■□□□ 1.93
VEGFA-231ENST00000640499 FARP1Q9Y4F1 1045 aaPredicted RBP27.13■■□□□ 1.93
VEGFA-231ENST00000640499 DMXL1Q9Y485 3027 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 C1QTNF3-AMACRE9PGA6 284 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 INSIG1O15503 277 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 MFSD11O43934 449 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 MAFKO60675 156 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 PRNPP04156 253 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 IGHV4-34P06331 123 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 RECQLP46063 649 aaPredicted RBP27.12■■□□□ 1.93
VEGFA-231ENST00000640499 RGRP47804 291 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 ADPRHP54922 357 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 SLC10A2Q12908 348 aaPredicted RBP27.12■■□□□ 1.93
VEGFA-231ENST00000640499 PIP5KL1Q5T9C9 394 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 C11orf63Q6NUN7 778 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 SYT12Q8IV01 421 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 RHOT1Q8IXI2 618 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 C1orf216Q8TAB5 229 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 FOXJ1Q92949 421 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 RNF157Q96PX1 679 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 VPS45Q9NRW7 570 aa27.12■■□□□ 1.93
VEGFA-231ENST00000640499 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.12■■□□□ 1.93
VEGFA-231ENST00000640499 LRRD1A4D1F6 860 aa27.11■■□□□ 1.93
VEGFA-231ENST00000640499 IPO7O95373 1038 aaKnown RBP27.11■■□□□ 1.93
VEGFA-231ENST00000640499 TNNT1P13805 278 aa27.11■■□□□ 1.93
VEGFA-231ENST00000640499 MARCKSL1P49006 195 aa27.11■■□□□ 1.93
VEGFA-231ENST00000640499 NCEH1Q6PIU2 408 aa27.11■■□□□ 1.93
VEGFA-231ENST00000640499 PRR23CQ6ZRP0 262 aa27.11■■□□□ 1.93
VEGFA-231ENST00000640499 MAP7D3Q8IWC1 876 aa27.11■■□□□ 1.93
VEGFA-231ENST00000640499 BIRC7Q96CA5 298 aa27.11■■□□□ 1.93
VEGFA-231ENST00000640499 EXOC2Q96KP1 924 aa27.11■■□□□ 1.93
VEGFA-231ENST00000640499 NSMCE3Q96MG7 304 aa27.11■■□□□ 1.93
VEGFA-231ENST00000640499 PCED1AQ9H1Q7 454 aa27.11■■□□□ 1.93
VEGFA-231ENST00000640499 EVLQ9UI08 416 aaPredicted RBP27.11■■□□□ 1.93
VEGFA-231ENST00000640499 ZBTB32Q9Y2Y4 487 aaPredicted RBP27.11■■□□□ 1.93
VEGFA-231ENST00000640499 PI4KAP42356 2102 aa27.1■■□□□ 1.93
VEGFA-231ENST00000640499 KPNA3O00505 521 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-231ENST00000640499 MUSKO15146 869 aa27.1■■□□□ 1.93
VEGFA-231ENST00000640499 SPOPO43791 374 aa27.1■■□□□ 1.93
VEGFA-231ENST00000640499 RHOAP61586 193 aa27.1■■□□□ 1.93
VEGFA-231ENST00000640499 SNRPD1P62314 119 aaKnown RBP27.1■■□□□ 1.93
VEGFA-231ENST00000640499 GBE1Q04446 702 aa27.1■■□□□ 1.93
VEGFA-231ENST00000640499 SLC10A7Q0GE19 358 aa27.1■■□□□ 1.93
VEGFA-231ENST00000640499 TAZQ16635 292 aa27.1■■□□□ 1.93
VEGFA-231ENST00000640499 LRRC57Q8N9N7 239 aa27.1■■□□□ 1.93
VEGFA-231ENST00000640499 TSEN2Q8NCE0 465 aaKnown RBP27.1■■□□□ 1.93
VEGFA-231ENST00000640499 KRT35Q92764 455 aa27.1■■□□□ 1.93
VEGFA-231ENST00000640499 RNF25Q96BH1 459 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-231ENST00000640499 ZDHHC6Q9H6R6 413 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms